Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00022 ATGAAGACCGTGGCGGAGGATGAGAGTGGTTTCACGCGCCTAGCCTCATTCGTCTGTGACTGTGAGCCTTTGACGGAGGAAGAACTCGAATGCATCGAAGCTTCTCTTTCCAACCCTAACAACAAACGTCGATTCAACGATCTCAGTCCCCGCCGCCGCTTGCCCGCATCGCTTATCGCTCTTCAACACCCAAATTTATCTTCTTTATCCCCTCTTTCAGGCTATTCAAGAATGAGATTACCAACATTTAAGTTTAGTGGTCAAATTATGTATAGCAGGACTTTTGATTCTGTAGAGAAAGCTGCAGCAAAACTCTTACTAGCTCTGGATGAAAAAAAGAGAGAGGTTATGCAAATTGCAATTGGATTTGACATTGAGTGGAAACCCTCCTTCACAAAAGGTGTTCCACCCGGAAAGGTAGCAGTCATGCAGATATGTGATGACAGTAGTCATTGTCATGTTCTACATCTAATTCATTCTGGAATCCCTCGAAATTTACAGCTATTGCTTGAAGATCCCACAGTTCTGAAGGTTGGAGTTGGGATTGATGGTGACGCTACGAAGGTTTTTAGAGATTATAAAATATCTGTTAAAGGTGTGATGGATCTTTCTTTCCGTGCTAATCAAAAGCTTGGTGGTGATCACAAGTGGGGACTTTCATCTTTGACTGAAAAACTTCTATCGAAACAGCTTAAAAAGCCCAATAAAATAAGACTAGGAAATTGGGAGACTCCAGTTTTGTCAAAGGAGCAACTAGAGTACGCTGCAACAGATGCTTTTGCTTCTTGGTATCTTTATAAGGCAATTAAAGATCTCCCGGACGCTCAAGAAGTCACGGACAGAAGTATCGAAGTTGATGGTTTATTGCAGGAATGA 876 0.4224 MKTVAEDESGFTRLASFVCDCEPLTEEELECIEASLSNPNNKRRFNDLSPRRRLPASLIALQHPNLSSLSPLSGYSRMRLPTFKFSGQIMYSRTFDSVEKAAAKLLLALDEKKREVMQIAIGFDIEWKPSFTKGVPPGKVAVMQICDDSSHCHVLHLIHSGIPRNLQLLLEDPTVLKVGVGIDGDATKVFRDYKISVKGVMDLSFRANQKLGGDHKWGLSSLTEKLLSKQLKKPNKIRLGNWETPVLSKEQLEYAATDAFASWYLYKAIKDLPDAQEVTDRSIEVDGLLQE* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00022 291 Coils Coil 95 115 - -
Lapu6g00022 291 SMART 35exoneu6 96 274 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lapu6g00022 291 Pfam 3'-5' exonuclease 102 270 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lapu6g00022 291 CDD WRN_exo 118 270 - -
Lapu6g00022 291 Gene3D - 74 277 IPR036397 GO:0003676
Lapu6g00022 291 SUPERFAMILY Ribonuclease H-like 121 270 IPR012337 -
Lapu6g00022 291 PANTHER 3-5 EXONUCLEASE 88 270 - -
Lapu6g00022 291 FunFam Werner Syndrome-like exonuclease 72 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00022 Lapu-Chr6 242301 245551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00022 K22807 - gmx:100801291 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00022 6 242301 245551 Lapu6g00022 6 242301 245551 ECH