Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00020 ATGGATCGAATTGGGTCTCCCCCGGACACCAGCAAGAGCATAAAGCTGGAGAGATACAACAGCTACATCCGGAGGGTCAACAGCACAAAGCTCCTAAACGCCTCCTCCAAGCTCCTCTTCCGCGCCACCCTCCTCGTCGCACTCATCCTCGTATTCCTCTTCACCTTCAACTACCCTCCCCTCGCCGACACCACCCACCGCCACCTCCACGCCCACTCCCACTTCCTCTCCTCCGCATTCGGCGCCTGGGAGAAGCAGGTCCGCCACTCCTCCACTCCGCGACGCCCCAACGGCCTCACCGTCCTCGTCACAGGGGCGGCGGGGTTCGTTGGGAGTCACTGCTCGCTGGCCCTCAAGAGGCGGGGCGATGGAGTGCTGGGTCTCGACAACTTCAACTCCTACTACGACCCCTCCCTGAAGCGCGCCCGCCAGGCAATGCTGGGGAAGCACCAGGTGTTCATCGTGGAAGGGGACCTCAACGACACGCCCTTGCTCGAGAAGCTCTTCGACGTGGTGGCCTTCACCCACATCCTCCACCTCGCCGCCCAGGCCGGCGTCCGCTACGCCATGCAGAACCCCCAGTCCTACGTCACCGCCAACATCGCAGGCTTCGTCAACCTTCTCGAGGTTGCCAAAGCCGCCAACCCCCAACCCTCCATAGTCTGGGCTTCCTCCAGCTCCGTCTACGGCCTCAACACCCAGAACCCCTTCTCGGAGCTCCACCGGACGGACCAACCCGCAAGCCTCTACGCCGCCACGAAGAAAGCCGGGGAGGAAATCGCCCACACCTACAACCACATTTACGGGCTCTCCCTGACCGGCCTGCGCTTCTTCACGGTGTACGGCCCTTGGGGGAGACCCGACATGGCTTACTTTTTCTTCACCAAAGACATCCTCCAGGGGAAGACGATCGACGTGTACGAGACGCAGGAGGGGAAGCAGGTGGCGCGTGACTTCACCTACATCGACGACATCGTGAAGGGGTGTCTGGGGGCTCTGGACACGGCCGAGAAGAGCACCGGGAGCGGTGGGAAGAAGCGTGGGCCAGCCCAGCTGAGGATCTACAATCTGGGCAACACCTCCCCCGTGCCCGTGGGGAACTTGGTCTCCATTCTGGAAGGCTTGCTGAACACTAAGGCCAAAAAGCACGTCATCAAGATGCCTTCCAACGGTGACGTTCCCTACACACACGCCAACGTCAGCTTGGCCTTCCGCGATTTCTCCTACAAACCCACCACCGATCTCCCCACCGGCCTCCGCAAGTTCGTCAAGTGGTACGTCGGTTATTACGGGCCCCACCTCCGCCTCAAGAAGGATTGA 1320 0.6152 MDRIGSPPDTSKSIKLERYNSYIRRVNSTKLLNASSKLLFRATLLVALILVFLFTFNYPPLADTTHRHLHAHSHFLSSAFGAWEKQVRHSSTPRRPNGLTVLVTGAAGFVGSHCSLALKRRGDGVLGLDNFNSYYDPSLKRARQAMLGKHQVFIVEGDLNDTPLLEKLFDVVAFTHILHLAAQAGVRYAMQNPQSYVTANIAGFVNLLEVAKAANPQPSIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYETQEGKQVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGPAQLRIYNLGNTSPVPVGNLVSILEGLLNTKAKKHVIKMPSNGDVPYTHANVSLAFRDFSYKPTTDLPTGLRKFVKWYVGYYGPHLRLKKD* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00020 439 FunFam UDP-glucuronate 4-epimerase 3 100 431 - -
Lapu6g00020 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 430 IPR036291 -
Lapu6g00020 439 Gene3D - 102 413 - -
Lapu6g00020 439 Pfam NAD dependent epimerase/dehydratase family 101 339 IPR001509 -
Lapu6g00020 439 PANTHER EPIMERASE-RELATED 83 431 - -
Lapu6g00020 439 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Lapu6g00020 439 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Lapu6g00020 439 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Lapu6g00020 439 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Lapu6g00020 439 Gene3D - 278 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00020 Lapu-Chr6 235186 236564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00020 4 439 Miscellaneous Gene Families AT3G23820 79.157 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00020 K08679 - gmx:100786653 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00020 6 235186 236564 Lapu6g00020 6 235186 236564 ECH