Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00015 ATGATGATGAAGAAGAAGAAACAGGTGCCGGAGTGGATGAACAGTTCTCTGTGGTCCTCCCCCTCCGACCACCACCGCTTTAGCCCGCCCTCTCCTCCCCCTCCTCCGCTGCCTCCTCCTCCTCCCCCTCCCCCTCCCCCCGTCTCTGTCAGAGAAGACCCCCCAACTAATCACGACGCCTCTCCTTCTTCTTCCTCCGTCGTCTCTTCTGCTTCTGCATCCTCCGCCGCCGATGACATCTCCTCTCAGGCTCAGTTGTTGACCGAGTTATCTAGGAAGGTGATAGACATGCGCGAGTTGAGGAGACTGGCTTCTCAAGGTATACCTCATGCTGCCGCCCCTGCTTTACGTCCTACGCTCTGGAAGCTTTTGCTTGGATATCTTCCATCCGATCGTGCCCTTTGGTCCTCTGAATTAGCCAAGAAGAGGTCCCAGTACAGACATTTCAAAGACGACCTCCTCATGAATCCTTCAGAAATCACGAGGAGGATCTACAACTCCGCTGCTCATGACATTGATGATGCAAAATCTGAGACTCGAATCTTGCTTTCTAGATCACATATCACTCATGAGGACCACCCTTTGAGTCTGGGCAAGACCAGCATATGGAATCAGTTCTTCCAGGACACAGAGCTCATAGAGCAGATTGATCGTGATGTAAAACGTACTCATCCAGATATACATTTCTTCTCTGGTGATTCTCAATTGGCAAAATCTAATCAGGATGCTTTAAAGAACATATTAATTATTTTTGCAAAGTTGAACCCAGGTATAAGATATGTTCAAGGGATGAATGAAGTATTGGCTCCTCTCTTCTATGTGTTAAAAAATGACCCTGACGAGGAAAATGCTGCTTTTGCTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTATTGAGTGGGTTCCAAGATAATTTTTGTCAACAACTTGATAATAGTATTGTTGGAATCCGTTCCACTATTGCAAGATTGTCTCAGCTTTTAAAAGAACACGATGAAGAACTGTGGCGTCATCTTGAGGTCACTACTCAGGTCAATCCCCAATTCTATGCATTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTTAATTTTTCTGACATCCTTCATATTTGGGACATCATTTTAAGTGATCCAGAGGGTCCACAGGAGACACTTCTCAGAATATGCTGTGCAATGCTAATTCTTGTCCGTAGGCGCCTCCTAGCGGGTGATTTTACTTCTAACCTCAAGTTGCTGCAAAGTTATCCCTCTACAAACATCAGTCACTTGCTCCATGTGGCAAATAAGTTACGTGTACAGACAGGCTAA 1311 0.4577 MMMKKKKQVPEWMNSSLWSSPSDHHRFSPPSPPPPPLPPPPPPPPPPVSVREDPPTNHDASPSSSSVVSSASASSAADDISSQAQLLTELSRKVIDMRELRRLASQGIPHAAAPALRPTLWKLLLGYLPSDRALWSSELAKKRSQYRHFKDDLLMNPSEITRRIYNSAAHDIDDAKSETRILLSRSHITHEDHPLSLGKTSIWNQFFQDTELIEQIDRDVKRTHPDIHFFSGDSQLAKSNQDALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVLKNDPDEENAAFAEADTFFCFVELLSGFQDNFCQQLDNSIVGIRSTIARLSQLLKEHDEELWRHLEVTTQVNPQFYAFRWITLLLTQEFNFSDILHIWDIILSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQSYPSTNISHLLHVANKLRVQTG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00015 436 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 316 434 IPR035969 -
Lapu6g00015 436 Gene3D - 315 435 - -
Lapu6g00015 436 SUPERFAMILY Formin homology 2 domain (FH2 domain) 38 47 - -
Lapu6g00015 436 MobiDBLite consensus disorder prediction 26 52 - -
Lapu6g00015 436 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 198 307 - -
Lapu6g00015 436 MobiDBLite consensus disorder prediction 1 70 - -
Lapu6g00015 436 Pfam Rab-GTPase-TBC domain 116 400 IPR000195 -
Lapu6g00015 436 FunFam TBC1 domain family member 13 314 435 - -
Lapu6g00015 436 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 79 414 - -
Lapu6g00015 436 SMART tbc_4 104 405 IPR000195 -
Lapu6g00015 436 MobiDBLite consensus disorder prediction 56 70 - -
Lapu6g00015 436 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 89 338 IPR035969 -
Lapu6g00015 436 ProSiteProfiles TBC/rab GAP domain profile. 111 379 IPR000195 -
Lapu6g00015 436 FunFam TBC1 domain family member 13 196 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00015 Lapu-Chr6 195924 201048 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00015 K24796 - gmx:100778830 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00015 6 195924 201048 Lapu6g00015 6 195924 201048 ECH