Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00013 ATGGGTCGTTGGTTTGTGTTTTGTTTGTTAGTAAGTGCAGTGATTGTTAATGGTGGTGAGTATGGTGACCCTGAAGTTCCCATCCCAACCACTCTGGACGGACCCTTCAAGCCTGTCACCGTTCCTCTCGATCAGAGCTTCCGAGGAAACGCCCTGGATTTGCCGCACACGGATCCTCTCCTTCAAACAACCGCTCAACCCTTCCAACCTCAACAGATCTCTCTCTCCCTCTCCGCTTCACATCACTCTGTTTCCGTTTCTTGGATCACAGGGGAATTCCAAATTGGGGACAACATCGAACCCTTAGATCCTAAAAGTGTTGCCAGCGTTGTTCGATATGGAAGGTTCGGCAGGTCCATGAGTCACCGAGCCACTGGTTATTCCCTCGTTTACAGTCAACTTTATCCTTTTGAAGGTCTTCAGAACTACACCTCTGGAATTATACATCACGTTCTTCTCACAGGATTGCGACCCAACACACTCTATCAATATGAATGCGGCGATCCTTCTCTTTCAGCAATGAGTGATGTTCATTACTTCAGGACTATGCCAGTTTCTGGCCCCAAGAGCTACCCTAACAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTTAACCATATCACCAGTAACCATCCTGATCTTATTCTGTTGGTTGGAGATGTTACTTATGCCAATCTTTATCTTACTAATGGTACTGGGGCAGACTGCTATTCTTGCGCATTTCCTAACACCCCCATTCCTGAAACCTATCAACCTCGTTGGGATTACTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCAATAATGATAATAGAAGGGAATCATGATGTAGAACCACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCTTTCCCATCAGAAGAGAGTGGATCATCATCCACTTTATATTATTCTTTCAATGCTGGAGGGATACATTTTATAATGCTCGGGTCCTACATATCGTATGACAAATCAGGGGACCAGTACAAGTGGCTGGAGAGAGACTTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGGTAGCTACATGGCATGCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAATGTATGAGGGTAGAGATGGAAGACTTGCTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAATCGGGTATACAACTACACATTGGATCCTTGTGGTCCTGTTTATATCACGGTTGGTGATGGTGGTAACCGGGAAAAGATGGCAATCACACATGCTGACGAACCTGGACAGTGTCCAGAACCATCAACTACACCAGATTACATTATGGGTGGCTTCTGCGCCTTTAATTTTACGTCTGGTCCTGCAGCAGGTAACTTCTGTTGGGATCGACAGCCTGATTATAGTGCTTTCAGAGAAAGTAGCTTTGGTCATGGCATTCTGGAGGTGAAAAACGAAACTCGTGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGGTAGTGCAGGAGATGAGATTTACATTGTTAGGCAACCTCAAAACTGCCCACCGTTCAAGCCAGCTGCATGA 1617 0.4527 MGRWFVFCLLVSAVIVNGGEYGDPEVPIPTTLDGPFKPVTVPLDQSFRGNALDLPHTDPLLQTTAQPFQPQQISLSLSASHHSVSVSWITGEFQIGDNIEPLDPKSVASVVRYGRFGRSMSHRATGYSLVYSQLYPFEGLQNYTSGIIHHVLLTGLRPNTLYQYECGDPSLSAMSDVHYFRTMPVSGPKSYPNRIAVVGDLGLTYNTTSTVNHITSNHPDLILLVGDVTYANLYLTNGTGADCYSCAFPNTPIPETYQPRWDYWGRYMQPLISSVPIMIIEGNHDVEPQAENQTFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSYISYDKSGDQYKWLERDLASVDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGQCPEPSTTPDYIMGGFCAFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEVKNETRALWIWHRNQDFYGSAGDEIYIVRQPQNCPPFKPAA* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00013 538 Pfam Purple acid Phosphatase, N-terminal domain 70 182 IPR015914 GO:0003993|GO:0046872
Lapu6g00013 538 SUPERFAMILY Metallo-dependent phosphatases 194 515 IPR029052 -
Lapu6g00013 538 Gene3D - 461 532 IPR029052 -
Lapu6g00013 538 Gene3D - 189 460 IPR029052 -
Lapu6g00013 538 PANTHER ACID PHOSPHATASE RELATED 15 529 IPR039331 GO:0003993
Lapu6g00013 538 Pfam Calcineurin-like phosphoesterase 194 406 IPR004843 GO:0016787
Lapu6g00013 538 Pfam Iron/zinc purple acid phosphatase-like protein C 421 513 IPR025733 -
Lapu6g00013 538 FunFam Purple acid phosphatase 189 451 - -
Lapu6g00013 538 SUPERFAMILY Purple acid phosphatase, N-terminal domain 48 184 IPR008963 GO:0003993|GO:0046872
Lapu6g00013 538 CDD MPP_PAPs 189 526 IPR041792 -
Lapu6g00013 538 Gene3D - 69 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00013 Lapu-Chr6 187100 190006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00013 54 431 Miscellaneous Gene Families AT1G13900 24.943 4.64e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00013 K22390 - gmx:100784006 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00013 6 187100 190006 Lapu6g00013 6 187100 190006 ECH