Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00002 ATGGAGATGCGAGGCATAATTTGTGTGCTCTTGCTGACCCTGTTGTCGATGGTACGGGGTGAAGACCCCTATCTCTTCTTTACCTGGAACATTACCTATGGCACCATCTCTCCATTGGGAGTACCCCAGCAAGGCATTCTCATCAATGGCAAATTCCCAGGACCCAATATCAATTCCACCAGCAATAACAATCTAGTTATCAATGTCTTCAACAATCTCGACGAGCCTTTTCTCTTTACATGGCATGGCGTCCAACACAGAAAGAATTCGTGGCAAGACGGGGTTGCCGGAACAAACTGCCCCGTTCCTCCAGGGACAAACCACACGTACCGTCTCCAGGTGAAGGACCAGATAGGCAGTTTCTTCTACTACCCGAGCACAGCCATGCACAGGGCAGCTGGAGGTTTTGGTGGGCTCCGTATAAACAGCAGGTTGCTGATTCCTGTGCCATACCATGATCCCGAGGACGAATATACGGTTGTGATTGGTGACTGGTACACGAAGAGCCACACCACTCTGAAGAAGCTCTTGGACAGCGGCCGGTCCATTGGGAGGCCTGAAGGTGTTCTCATCAACGGCAAAACAGCTAAAGGTGATGGAAATGACGAGCCACTCTTCACCATGAAACCCGGAAAGACCTACAAATACCGAATATGCAACGTAGGGATGAAGAATACACTAAACTTTAGGATCCAAGGCCACTTGATGACGCTTGTTGAGATGGAAGGCTCCCACGTGGTGCAAAACAAGTACGACTCTCTGGACGTCCATGTAGGGGGGTGCTTTTCTGTCCTTGTCACAGCAGACAAGGATCCAAAGGATTACTACATGGTGGCTTCCACGCGTTTCAGCAAGGCTCATCTCACAGGTAAAGCCATCATCCGTTACACAAATGGCAAGGGTGCTCCCTCGCCTGACATCCCCGAAGCTCCAGCGGGCTGGGGTTGGTCTCTCAACCAATTCCGTTCCTTCCGCTGGAATCTCACTGCCAGCGCCGCCAGGCCCAACCCTCAGGGTTCCTACAAATACGCAAAAATCGACATCACCCGTACCATCAAGCTCGTCAACACCGTCAGTAGGGAAAACGGTAAGCTTCGCTATGCCCTCAATGGTGTCTCCCACGTCGACCCCGAAACTCCACTCAAGCTAGCTGAATACTTTGGAGTGGCTGACAAGGTTTTCAAATATAATACTATCCAAGACGAACCACCCTCTGACCTTGGAACCACTGTTCAAATTCAACCAAATGTTCTTAACGTTACCCATCGTAAATTCATCGAGATCATCTTTGAAAACCATGAAAAATCAATCCAGTCATATCACTTGGATGGTTATGCGTTCTTCGCAGTCGGCATAGAGCCTGGCACATGGACCCCAGAGAAGAGGAACAGCTACAACCCTCTCGATGCCGTCAGCAGACACACAATACAGGTGTTCCCAAAATGTTGGGCCGCCATCTTGTTGTCAACCGACAACGTTGGAATGTGGAACCTGAGATCGTTGATTGTTGAAAATATGTATCTTGGCCAACAGCTATACATCAGCATTATGTCCCCCGAGCGTTCTCTGAGGGACGAGTACACTATGCCAGATGACAACCTACTTTGCGGTGTTGTTAAGAATTTGCCAAAGCCACCACCATACACCTAA 1650 0.4945 MEMRGIICVLLLTLLSMVRGEDPYLFFTWNITYGTISPLGVPQQGILINGKFPGPNINSTSNNNLVINVFNNLDEPFLFTWHGVQHRKNSWQDGVAGTNCPVPPGTNHTYRLQVKDQIGSFFYYPSTAMHRAAGGFGGLRINSRLLIPVPYHDPEDEYTVVIGDWYTKSHTTLKKLLDSGRSIGRPEGVLINGKTAKGDGNDEPLFTMKPGKTYKYRICNVGMKNTLNFRIQGHLMTLVEMEGSHVVQNKYDSLDVHVGGCFSVLVTADKDPKDYYMVASTRFSKAHLTGKAIIRYTNGKGAPSPDIPEAPAGWGWSLNQFRSFRWNLTASAARPNPQGSYKYAKIDITRTIKLVNTVSRENGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYNTIQDEPPSDLGTTVQIQPNVLNVTHRKFIEIIFENHEKSIQSYHLDGYAFFAVGIEPGTWTPEKRNSYNPLDAVSRHTIQVFPKCWAAILLSTDNVGMWNLRSLIVENMYLGQQLYISIMSPERSLRDEYTMPDDNLLCGVVKNLPKPPPYT* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00002 549 Pfam Multicopper oxidase 381 518 IPR011706 GO:0005507|GO:0016491
Lapu6g00002 549 SUPERFAMILY Cupredoxins 346 536 IPR008972 -
Lapu6g00002 549 PANTHER MULTI-COPPER OXIDASE 43 512 IPR045087 -
Lapu6g00002 549 Gene3D - 343 542 IPR008972 -
Lapu6g00002 549 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
Lapu6g00002 549 Gene3D - 25 145 IPR008972 -
Lapu6g00002 549 Gene3D - 153 334 IPR008972 -
Lapu6g00002 549 Pfam Multicopper oxidase 157 298 IPR001117 -
Lapu6g00002 549 CDD CuRO_1_AAO_like_1 25 142 IPR034273 GO:0005507
Lapu6g00002 549 SUPERFAMILY Cupredoxins 21 171 IPR008972 -
Lapu6g00002 549 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Lapu6g00002 549 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00002 Lapu-Chr6 60800 62681 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00002 K00423 - gmx:100782413 966.066