Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01102 GCCATTACCGTTACCCACTGCAGTGGTTATCGTGACAAAGCTACGTCATTGACTTGGCATCTCACTCACAAGCAATCCCCTTCTTTTTCTTTCACTTCTCTCTTTCTCTCTCTCTCTCTCCCTCCTTCTTCTGCAATGGGTTGTGCTGGATCTTCACAATCCAAGCCTGATGGTGCAGTAAGAAAGATCCGGAAGCCTAAGCCATGGAAGCATCCTCAACCCATAACAAAGACTCAGCTAACACAATTACGTGATGAGTTTTGGGACACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCCGAGGCTGATCTAACTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTAATTGTCCAAAGTTCTGATTTGACAGTTTGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCGAAGTACGTATTGAGTGAGCCAACTAACCTGATTCGGGAGAGTTAA 480 0.4625 AITVTHCSGYRDKATSLTWHLTHKQSPSFSFTSLFLSLSLPPSSAMGCAGSSQSKPDGAVRKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRES* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01102 159 Pfam Ubiquitin-binding domain 61 157 IPR032752 -
Lapu5g01102 159 MobiDBLite consensus disorder prediction 47 74 - -
Lapu5g01102 159 Gene3D - 76 149 IPR038169 -
Lapu5g01102 159 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 46 159 IPR039869 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01102 - - gmx:100306399 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01102 5 22341370 22346124 Lapu5g01102 5 22341370 22346124 ECH