Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01099 ATGGAATCGGTGAAGCCATTGGCCGTGACCCCGCGGAAGAAGCTGGCTCGCAGTTTTGCCAAGGTTCTTCATGTCAAAGCTCTGATTGGGATTGCCTCTGTTGATGGGTTGAAGAATGTTATATCTGATGCGAATCTCAAGGATGAAGGGAACATGGGGAAGAGTAAGAGCTCACTGAATTGGTCTGAGTCTTTTGGCGAAGATGATGCTGAAGAGCTTCAGGAGAGAATGGCCAATGAAGCTCTTCTAGCAAAGCTTTTTGCAAGCATTTCAACTGTTAAAGGTGCATATGCCGAGTTGCAATATTCGCAGTCACCTTTCGACCCTGATGGAATTGAAGCTGCTGATCAATTGCTAGTGTCTGAGTTGAAGAACTTGTCTGAGCTGAAGCAATGTTTCTTGAAGAAACAGTTTGATCCTTCGCCCGAGACAGCGATTCTTGAGGCTGAATCCAAGGAGCTGCAGGGTGTGATCAAGACATATGAGATCATGGGGAAGAAGCTAGAGTCACAGGTGCGGCTCAAGGATTCTGAGATTATTTTTCATAGGGAGAAGTTAGAGGAAGCTAATAGGCATAACAAGGCAATTGAGAAGAGATTAAATCAAAGCGGCCAACTAGCTGTGCTTGATAATCTTCACATATCAGGGTTAAGTCCTAGCCATTTTATCACAGTTCTTCGCCATGCGGTTAGGTCCGTTCGCAACTTCGTGAGGGTGATTGTGGATGAGATGAGATCTGCTGGTTGGGATGTTGATGCGGCAGTCAATGCCATTGAGCAGAATGTGGTTTATTTGGCAGAAGATCACAAGTGTTTTGCAATTGAGGCATTCGTTTGCAGGGAGATGTTTGATGCTTTCCACTTCCCAAACTTTTCTCTGTCAAATGAATCTCTCCCTGATAGAACCAGGAGGCAACAGTGGTTCTTTGGGAGGTTCAACGAGATGAAATCCATGAAGGCAAAGGACTTCCTTGCCGAGAAGCCAAGATCTTCATTTGCAAAGTTTTGCAGGATGAAGTACTTGAAACTTGTTCATCCCAAGATGGAGTCATCATTTTTTGGTAACATGAGTCACAGAAACCTTGTGAATGCTGGAGAGTTTCCAGACACTGCATTCTTCACATCATTTGCTGAGATGGCCAAGAGGGTGTGGCTTCTACACTGCTTAGCCTTCTCTTTTGAGCCCCAGGCTTCAATCTTCCAAGTGGGGAAAGGGTGTAGATTCTCTGATGTGTACATGGAAAGTGTGAATGATGAAATCTTCCTCTATTCAGAAGTGGAATCAGATCCACAAGTTGCTTTCACAGTAATTCCGGGGTTTAGGATTGGTAAAACTGTTATACAGTGTCAAGTGTACCTCTCACAGCACCAAAGCAAGGCAAAAAAATTAACTTCCACAAAGCAAAGGTAG 1410 0.444 MESVKPLAVTPRKKLARSFAKVLHVKALIGIASVDGLKNVISDANLKDEGNMGKSKSSLNWSESFGEDDAEELQERMANEALLAKLFASISTVKGAYAELQYSQSPFDPDGIEAADQLLVSELKNLSELKQCFLKKQFDPSPETAILEAESKELQGVIKTYEIMGKKLESQVRLKDSEIIFHREKLEEANRHNKAIEKRLNQSGQLAVLDNLHISGLSPSHFITVLRHAVRSVRNFVRVIVDEMRSAGWDVDAAVNAIEQNVVYLAEDHKCFAIEAFVCREMFDAFHFPNFSLSNESLPDRTRRQQWFFGRFNEMKSMKAKDFLAEKPRSSFAKFCRMKYLKLVHPKMESSFFGNMSHRNLVNAGEFPDTAFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVGKGCRFSDVYMESVNDEIFLYSEVESDPQVAFTVIPGFRIGKTVIQCQVYLSQHQSKAKKLTSTKQR* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01099 469 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 13 454 IPR040225 GO:0009639|GO:0009959
Lapu5g01099 469 Coils Coil 179 206 - -
Lapu5g01099 469 Pfam Plant protein of unknown function (DUF641) 75 199 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01099 Lapu-Chr5 22236672 22241769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01099 - - gmx:100810236 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01099 5 22236672 22241769 Lapu5g01099 5 22236672 22241769 ECH