Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01085 ATGTCCAGCAAGGGAAAGGAGGTAGCAGAAGGGTCATCAAGAGCCTCTGGAGGGGGTGATGATCACAATCAGCAGCAGCAGCAGCAACAGTTACCACTGAGTCGCTATGAGTCTCAGAAGAGAAGAGACTGGAACACTTTTGGACAGTACTTGAGGAATCAGAGGCCTCCTGTGGCACTTTCTCAGTGTAGTTCCAGCCATGTGCTTGAGTTCCTTCGTTACTTGGATCAGTTTGGGAAAACCAAAGTGCACTTACAAGGGTGCTTGTTTTTTGGGCAAAGTGAGCCACCTGGACCCTGCACTTGCCCTCTTAGACAAGCTTGGGGAAGCCTTGATGCACTCATTGGAAGGTTGAGAGCTGCATATGAAGAAAATGGAGGCCTTCCTGAGACCAATCCCTTTGCAAGTGGTGCCATAAGAGTCTATCTTAGAGAGGTCAGGGATTCTCAGGCTAAGGCTAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATATTATCAAGCCCAACGGAGACACCTCCTCAAACTTGCCTATGCAGTAA 546 0.4799 MSSKGKEVAEGSSRASGGGDDHNQQQQQQQLPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCSSSHVLEFLRYLDQFGKTKVHLQGCLFFGQSEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNIIKPNGDTSSNLPMQ* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01085 181 PANTHER PROTEIN G1-LIKE2 9 169 IPR040222 -
Lapu5g01085 181 MobiDBLite consensus disorder prediction 153 181 - -
Lapu5g01085 181 MobiDBLite consensus disorder prediction 1 39 - -
Lapu5g01085 181 ProSiteProfiles ALOG domain profile. 35 162 IPR006936 -
Lapu5g01085 181 Pfam ALOG domain 27 148 IPR006936 -
Lapu5g01085 181 MobiDBLite consensus disorder prediction 17 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01085 Lapu-Chr5 21971489 21973797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01085 - - gmx:100806493 324.324