Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00910 ATGGCCGCCACTCTACCCTCCGACTTCGACGACCTCCGCACGCCGATGCTGTCAGCGGCGGCCAAGAAACCGGCATCGGAGAAGCTCTGCATCGATGACATGCTGCAGAAGTACTGCGGCGAGTTTGGGCGGTGGCAGCTCAAGCACTTCATCCTCACCAGTCTCGCCTGGGCCCTCGAGGCTTTCCACACCATGGTCATGATCTTTGCAGATCGCGAACCAGACTGGAGGTGCATCCCCGGCACTGACTGTAACGGTGGAGGAGCTAGCGACGGCTGTGGCCTCTCATCGGAGGTGTGGGAGTGGGTCGGCGGCCGCCACAGCTCCACCGTGTCAGAATGGAGTCTGATTTGCAGTGATAAATTCAAGGTTGGGTTGGTTCAGGCCATGTTCTTCACTGGATGCATGATTGGTGCTGGAATATTTGGCCACCTCTCAGACTCCTCTCTAGGAAGAAAAGGCTCTCTCACAGTGGTTTGCGCTCTCAACACCCTCTTTGGCTGTTTAACAGCACTGTCCCCTAACTACTGGATTTACGTCCTCCTCCGCCTCCTCACTGGCTTCAGCAGCGGCGGCGTTGGCCTCACTGCTTTCGTCCTCGCAACTGAACCAATTGGTTCCTCGAAGCGAGGCACGGCGGGCATGTCCACCTTCTACTTCTTCTCCGGTGGCATTGCAGTTCTCTCTGTCATTGCTTACATCTTTCAAACATGGCGTTATCTCTACATAGCTTCCTCCATCCCCTCCCTTCTCTACATCATCCTTGTCCTACCCTTTATCTCTGAGTCCCCAAGATGGTACCTTGTTCGCGGGAAAGTAGTCGAAGCCACGAAGCTCATGTCCACCATTGCTTCTTCCAACGGGAGACACCTTCCCGATGGTGTTCTCCTCACACTTGACGACGAAGCATCGTCCACAAAAAACGAAGGTTCAGCTCATGACATAACACCGGCGACATACAAAAAGGAAAGCGTAGAAAACAAAGACGCGCTAGTTGGATCCATAGTGGACGTGATTCGTTCTCCGGTCACTCGTGTAAGGTTGTTCTTAGCGGTGGTTATTAACTTCTTAGGCTCAGTTGTGTACTACGGGCTTAGTTTAAACGTCATGAACCTCGAAACCAACCTTTACCTGAACGTGATATTGAACTCCGTGGCAGAGATGCCGGCGTTTACGATAACGGCGATGTTTTTGGACAGGTTTGGAAGGAAGCCGTTGACGGTGGCGACAATGTGGTTTAGCGGGTTGTTTTGTTTGTTGGGGAGTTTGACTGGCAGCGTTGGGGTGTGGAAGGTGGTAAGAATGGTGTGTGGTGTTTTGGGGATATTTGGGATGGCGGGGACTTATAACTTGTTGTTTATTTATACGGCGGAGCTGTTTCCGACGGTGGTAAGGAACGCGGCACTAGGATGCGCCACGCAGGCAGCCCAAATGGGAGCGATATTGGCGCCGTTTGTGGTGGTTTTGGGTGGGTGGGTGCCGTTTTCGGTGTTTGCAGCATGTGGAATAGTGGGAGGAATGCTTGCGTTTTATCTTCCAGAAACGCTGAACCAACCTCTCTATGACACATTCAGTGGAATGGAAGCAGGACTTGCTTGA 1599 0.5272 MAATLPSDFDDLRTPMLSAAAKKPASEKLCIDDMLQKYCGEFGRWQLKHFILTSLAWALEAFHTMVMIFADREPDWRCIPGTDCNGGGASDGCGLSSEVWEWVGGRHSSTVSEWSLICSDKFKVGLVQAMFFTGCMIGAGIFGHLSDSSLGRKGSLTVVCALNTLFGCLTALSPNYWIYVLLRLLTGFSSGGVGLTAFVLATEPIGSSKRGTAGMSTFYFFSGGIAVLSVIAYIFQTWRYLYIASSIPSLLYIILVLPFISESPRWYLVRGKVVEATKLMSTIASSNGRHLPDGVLLTLDDEASSTKNEGSAHDITPATYKKESVENKDALVGSIVDVIRSPVTRVRLFLAVVINFLGSVVYYGLSLNVMNLETNLYLNVILNSVAEMPAFTITAMFLDRFGRKPLTVATMWFSGLFCLLGSLTGSVGVWKVVRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPFVVVLGGWVPFSVFAACGIVGGMLAFYLPETLNQPLYDTFSGMEAGLA* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00910 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 517 IPR020846 GO:0022857
Lapu5g00910 532 SUPERFAMILY MFS general substrate transporter 120 520 IPR036259 -
Lapu5g00910 532 ProSitePatterns Sugar transport proteins signature 1. 394 410 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu5g00910 532 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 521 - -
Lapu5g00910 532 Pfam Sugar (and other) transporter 120 521 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu5g00910 532 ProSitePatterns Sugar transport proteins signature 2. 185 210 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu5g00910 532 Gene3D MFS general substrate transporter like domains 50 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00910 Lapu-Chr5 14652453 14657825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00910 1 528 Organic Solute Cotransporters AT3G20660 67.797 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00910 K08202 - gmx:100797665 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00910 5 14652453 14657825 Lapu5g00910 5 14652453 14657825 ECH