Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00860 ATGTTATTTTATCTTTGTGATATGCAGGGTAAGTCAACAGAGAAGCAATGTCCCATTGTAATGAAGCTTAAACGATGGGAACGGAAGAAGTGTAAACCAAAGAGCCTTCCTATCTTGCAAAAAATGCATGTTAAACTTGGAGATACGGTGCAAATCATAACTGGAAGTGAAAGGGGTAAAGTTGGGGAGATTACTAGAATCTTCAAGCATAACAGCACAGTAATAGTGAAAGATTTAAATTTGAAGACAAAGCATAACAGCACAGTAATGCAAATTATAAAGGTTGTCCTCATTTCCCTTGCTTTACTTTGTAAATCCTTTTACTAG 327 0.3578 MLFYLCDMQGKSTEKQCPIVMKLKRWERKKCKPKSLPILQKMHVKLGDTVQIITGSERGKVGEITRIFKHNSTVIVKDLNLKTKHNSTVMQIIKVVLISLALLCKSFY* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00860 108 SUPERFAMILY Translation proteins SH3-like domain 10 89 IPR008991 -
Lapu5g00860 108 SMART kow_9 43 70 IPR005824 -
Lapu5g00860 108 CDD KOW_RPL26 47 85 IPR041988 GO:0003723
Lapu5g00860 108 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 22 86 IPR003256 GO:0003735|GO:0005840|GO:0006412
Lapu5g00860 108 Pfam KOW motif 47 77 IPR005824 -
Lapu5g00860 108 Gene3D - 7 105 IPR014722 -
Lapu5g00860 108 ProSitePatterns Ribosomal protein L24 signature. 47 64 IPR005825 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00860 Lapu-Chr5 9568552 9569415 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00860 K02895 - gmx:100500009 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00860 5 9568552 9569415 Lapu5g00860 5 9568552 9569415 ECH