Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00846 ATGCAGCTGCACATATCTCCAAGTTTGAGGCATGTCACTGTGTTTCCAAGCAAAGGGTTCAAGGAGTTTATCAAAGTGAAGGTTGCATCAAGACGTGTCTCTTATCGGATGCTTTTCTATTTTCTCTTGTTCTCCACTTTTCTTCTTCGGTTTGTGTTTGTCTTAACAGCAGTGGATGGCATTGATGGAGAAAACAAATGCTCTACCATAGGTTGCCTAGGGAAAAAACTAGGACCAAGGATTTTGGGGAGACGGCCTGAATCAACAGTCCCAGAAGTGATATACCAAACATTAGATGAACCTCTTGGCAAACATGAACTTCAGGGTAGGTTTGATATTCCACAGACCTTAGAAGAGTTCATGACTGAAATGAAGAAAGGTGGATATGATGCCAAGACTTTTGCAGTTAAACTTCGAGAAATGGTGGCCCTTATGGAAGAAAGGACCAGAATGGCCAAGATTCAAGAATATCTGTATCGACATGTAGCATCAAGCAGTATACCAAAACAACTTCATTGCCTTTCCTTGAGTTTGGCCAATGAACACACCAACAATGCCGCAGCACGCCTTCAGCTCCCCTCTGCAGAACTAGTCCCTGCCCTGGTTGACAATTCCTACTTCCATTTTGTCCTTGCCTCAGACAATGTGCTGGCTGCATCAGTGGTTGCAACATCGCTTGTTCGCAACTTTTTGAGACCTCAGAAGGTTGTTCTGCACATAATCACAGACAGGAAGACTTATTACCCCATGCAGGCTTGGTTCTCATTACATTCTTTGTCACCTGCTATAATTGAGGTGAAGGCATTGCACCATTTTGATTGGTTTACGAAGGGAAAGGTGCCTGTTCTGGAAGCTATGGAGAAGGATCAAAAGGTGAGGTCACAGTTTAGAGGGGGTTCATCAGCTATAGTTGCAAATACTACTGAGAAGCCAAAAGTTATTGCAGCCAAACTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATCCGGATACATCTCCCAGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGATGATGACATCGTGGTACAAACTGATCTTTCCCCTCTGTGGGACATTGAAATGAATGGAAAAGTGAATGGAGCTGTAGAAACATGTACAGGAGAAGATAAGTTTGTTATGTCAAAGAAATTGAAAAGCTATTTGAACTTCTCCCACCCTCTGATATCCAAAAATTTTAATCCCAATGAATGTGCCTGGGCCTATGGCATGAACATTTTCGATTTGGAGGCTTGGCGGAAGACTAATATAAGCAATATTTACCATTACTGGGTTGAGCAGAATATCAAATCAGATCTGAGTTTGTGGCAGCTGGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACGTTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAGGAAAATACAAGTTTTGCTGATGCTGAGAGTGCTGGTGTCGTCCATTACAATGGCAGGGCAAAGCCATGGCTAGAAATAGCTTTTCCACAACTACGGAAATTGTGGACGAAGTATGTTGACTTCTCAGATAAGTTCATTAAGAGTTGTCACATTAGGGCATCATAG 1602 0.427 MQLHISPSLRHVTVFPSKGFKEFIKVKVASRRVSYRMLFYFLLFSTFLLRFVFVLTAVDGIDGENKCSTIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPLGKHELQGRFDIPQTLEEFMTEMKKGGYDAKTFAVKLREMVALMEERTRMAKIQEYLYRHVASSSIPKQLHCLSLSLANEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNFLRPQKVVLHIITDRKTYYPMQAWFSLHSLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIEMNGKVNGAVETCTGEDKFVMSKKLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRKTNISNIYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFADAESAGVVHYNGRAKPWLEIAFPQLRKLWTKYVDFSDKFIKSCHIRAS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00846 533 CDD GT8_like_1 207 519 - -
Lapu5g00846 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 112 530 IPR029993 GO:0047262
Lapu5g00846 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
Lapu5g00846 533 Pfam Glycosyl transferase family 8 206 506 IPR002495 GO:0016757
Lapu5g00846 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00846 Lapu-Chr5 9044061 9049613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00846 1 533 Glycosyltransferase AT5G54690 79.252 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00846 K20867 - gmx:100812550 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00846 5 9044061 9049613 Lapu5g00846 5 9044061 9049613 ECH
Lapu5g00846 5 9044061 9049613 Lapu5g00846 5 9044061 9049613 PCT