Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00830 ATGGTGTTTTTGTTCGGAATGGAACTTCATAGTTATTTGTCTGTCAGCACCGCCACATCTGTTATTGTTGACAAGAGTAGTGATGGGGACTATTTACGTATAGATTTCAATATGAGTTTTCCGGCTCTCTCTTGTGAGTTTGCAGCAGTTGATGTGAGTGACGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAATTCGCAAGTTTTCTATTGATTCAAATTTAAAAGCCACTGGTAACGAGTTCCATTCAGAACCGGCGACTACCAACATAAAGCACGATAATGAAGTACACGAAGAATCCATTGGAGGTGCTCTTGAACTCACTGCAGATACTTTTGATAAATATGCTCACCAGTTTCCAATTACAGTTATTAATTTTTATGCTCCTTGGTGTTATTGGAGTCAACGATTGAAACCTTCATGGGAAAAAGCAACTAAAATAATTCGAGAGAGATATGATCCAGATGTTGATGGTCGTATTATTATGGGGAGGGTAGATTGTACCCAAAATGGAGATTTATGCCGGAGCCATCATGTACAAGGGTATCCTTCAATTCGTATCTTTCGAAAAGGAAGTGATGTAAGGAGTGACCATGGACATCATGATCACGAATCCTATTATGGTGATCGCGACACAGATAGCCTAGTCAAGACAATGGATAATTTAGTGGCGTCTCTCCCTACAGAATCTCAGAAGTCACATTTGGGGGATAAATCCAATGTTGCATCAACTATAAAAAGACCAGCACCATCAGCTGGGGGATGTAGAATTGAAGGATATGTGCGTGTCAAGAAGGTTCCTGGAAACTTGATCATCTCAGCTAGATCTGGTGCCCATTCCTTTGACGCTTCTCAAATGAACATGTCACATGTCATAAACCACTTGTCTTTTGGAAGGAAAGTGTCACCTAGGGTTATGAGTGATGTGAAGCGCTTGATACCTTACGTTGGTAGCAGCCATGACAGGCTGAATGGCCTGTCATTTATCAATACACGTGATTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGATAGTTAAAACAGAGGTGATAACAAGAAAAGATTATAAATTAGTTGAGGAGTACGAGTACACAGCGCACAGCAGTGTGGCGCAGAGTTTACACATTCCTGTTGCTAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACGGAAAATCCGAAGTCCTTTTCTCACTTCCTTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTTTGTATCTCATATTGTGGTTCAGTACCTGTATTGTCCTCTATTTGTAGGGTTGACGAGTCGTCTTTGTGGTTTTCAGGTTGCTGGAATTTTGGACTCGATTTTGCACAACACTATTAG 1374 0.4105 MVFLFGMELHSYLSVSTATSVIVDKSSDGDYLRIDFNMSFPALSCEFAAVDVSDVLGTNRLNLTKTIRKFSIDSNLKATGNEFHSEPATTNIKHDNEVHEESIGGALELTADTFDKYAHQFPITVINFYAPWCYWSQRLKPSWEKATKIIRERYDPDVDGRIIMGRVDCTQNGDLCRSHHVQGYPSIRIFRKGSDVRSDHGHHDHESYYGDRDTDSLVKTMDNLVASLPTESQKSHLGDKSNVASTIKRPAPSAGGCRIEGYVRVKKVPGNLIISARSGAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGLSFINTRDLGANVTMEHYLQIVKTEVITRKDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENPKSFSHFLTNVCAIIGGVFTVCISYCGSVPVLSSICRVDESSLWFSGCWNFGLDFAQHY* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00830 457 CDD PDI_a_family 107 221 - -
Lapu5g00830 457 Pfam Endoplasmic reticulum vesicle transporter 253 420 IPR012936 -
Lapu5g00830 457 Pfam Thioredoxin 107 205 IPR013766 -
Lapu5g00830 457 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 419 IPR045888 -
Lapu5g00830 457 FunFam Protein disulfide-isomerase 5-4 94 249 - -
Lapu5g00830 457 Gene3D Glutaredoxin 89 249 - -
Lapu5g00830 457 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 1 60 IPR039542 -
Lapu5g00830 457 ProSiteProfiles Thioredoxin domain profile. 74 226 IPR013766 -
Lapu5g00830 457 SUPERFAMILY Thioredoxin-like 107 224 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00830 Lapu-Chr5 8642182 8650467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00830 - - gmx:100806869 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00830 5 8642182 8650467 Lapu5g00830 5 8642182 8650467 ECH