Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00818 ATGGATTCATCTTCTCTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACATTTAACTCCATTTCTCCACCTCTCCAACAAATTAGCAAAGAGAGGACACAAGATCTCCTTCTTCGTCCCTAGAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTTCCCAGATCTCATCACCTTTTTCCCTATCAATGTTCCTCACGTTGAAGGTCTTCCTCGTGGCGCAGAAACCACTTCCGATGTGTCTTTTTCTTTAGGTCCACTCATTATGACAGCCATGGACCGCACTGAGAGGGATATAGAGCTTCTCCTCAATGAGCTAAAACCACAGATTGTTTTCTTTGACTTCACATATTGGATCCCAAACTTGACTCGTCGCTTGGGGATCAAATCTTTTCAATACTTGATTATTGGCCCAGCAACAGTATCTTACGTTAGATCCCCACCAAGGATGCAACAAAACATATCTGAAAGAGATCTGATGCAACCCCCTCCTGGGTATCCTGTGTCATCCATCAAGCTTCATGCCCATGAAGCCAAGTTCCTTGCTTCTAAAAGGAATTGGGAGTTTGGTAGCGGTGTTCTCTTCTATGATCGTCTCAACAATGGTTTGATGCTATCAGATGCAATTGGGTTCAAAGAACCTATTATACCTGAGCCACCAAATACTGTTTTGGAGGAAAAATGGAGTTCATGGCTTGGAAAGTTCAAGGATGGTTCTGTGGTTTTCTGTGCACTTGGGAGTGAATGGAAATTATCGCATGGTCAATTCGAAGAATTGTTGTTGGGTCTTGAACTTACAGGGCTTCCATTTTTGGCTGTTCTAAAAGTTCCTATTGGGTTTGAGATAATTGAAGCTGCACTCCCAGAAGGGTTTATGGAAAGGATTGAAAGGAGAGGGATTGTCCACAGTGGATGGATACAACAACAGTTGATTTTGGAACACCCATCAGTGGGTTGTTTCATAACACACTGTGGTGCTGGTTCATTAACTGAGGCACTGGTAAATAAGTGTCAAATGGTGTTACTGCCACAACTAGATGGTGATCATGTCATTAATGCAAGGATGATGGTAGCAACTTGA 1083 0.4266 MDSSSLHIAMFPWFAMGHLTPFLHLSNKLAKRGHKISFFVPRRTQSKLEQFNLFPDLITFFPINVPHVEGLPRGAETTSDVSFSLGPLIMTAMDRTERDIELLLNELKPQIVFFDFTYWIPNLTRRLGIKSFQYLIIGPATVSYVRSPPRMQQNISERDLMQPPPGYPVSSIKLHAHEAKFLASKRNWEFGSGVLFYDRLNNGLMLSDAIGFKEPIIPEPPNTVLEEKWSSWLGKFKDGSVVFCALGSEWKLSHGQFEELLLGLELTGLPFLAVLKVPIGFEIIEAALPEGFMERIERRGIVHSGWIQQQLILEHPSVGCFITHCGAGSLTEALVNKCQMVLLPQLDGDHVINARMMVAT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00818 360 FunFam Glycosyltransferase 228 360 - -
Lapu5g00818 360 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 305 359 IPR002213 GO:0008194
Lapu5g00818 360 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 359 - -
Lapu5g00818 360 CDD GT1_Gtf-like 6 359 IPR002213 GO:0008194
Lapu5g00818 360 Gene3D Glycogen Phosphorylase B; 4 208 - -
Lapu5g00818 360 PANTHER GLYCOSYLTRANSFERASE 6 358 - -
Lapu5g00818 360 Gene3D Glycogen Phosphorylase B; 226 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00818 Lapu-Chr5 8411636 8413176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00818 4 357 Glycosyltransferase AT5G54010 46.174 2.95e-119 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00818 K22794 - gmx:100808470 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00818 5 8411636 8413176 Lapu5g00818 5 8411636 8413176 ECH