Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00620 ATGGCTGCCACTGCATCATCCCCTTTCAAGAAAATTCAGATTCAAAGGGATGACACTACATTTGACGCATATGTGGTTGGAAGAGAGGATGCTCCAGGAATTGTTGTGATTCAGGAGTGGTGGGGTGTGGACTACGAAATTAAGAACCACGCTGTGAAGATTTCGCAGCTTGGTACTGGGTTTAAAGCTCTTATCCCAGATCTGTACAGAGGAAAGGTTGGTCTGGAAGTTGCTGAGGCTCAGCATTTGATGGATGGTCTTGATTGGCAAGCTGCTGTCAAGGATATTGCTGCTTCAGTTAACTGGCTTAAAGCGAATGGTTCAAAGAAGGTTGGAGTAACTGGGTTTTGTATGGGAGGAGCCCTCTCTATTGCCAGTTCTGTCTTGGTTTCAGAGGTTGATGCTGCTGTAGCATTTTATGGAGTTCCTTCTTCTCAGCTTGCAGACCCTGCCCAAGTCAAGGCTCCTGTTCAGGCTCACTTTGGAGAGCTGGATAGTTTTGTTGGCTTTTCAGATGTTACAGCGGCCAAGGCCTTGGAAGAAAAGCTGAAGGCATCCGGAGTTCCACATGAGGTGCATATCTATCCTGGCAATGCACATGCATTCATGAACAGGTCTACAGAAGGAATCCAGAGGAGGAAGCACATGGGAATGCCTGATGAAGATGAAGCTGCAGTTCAGCTTGCATGGTCTCGCTTTGAGACATGGATGACTCGTTACTTATCTATTTGGGATGCTTATTGTGAAATTTGA 753 0.4635 MAATASSPFKKIQIQRDDTTFDAYVVGREDAPGIVVIQEWWGVDYEIKNHAVKISQLGTGFKALIPDLYRGKVGLEVAEAQHLMDGLDWQAAVKDIAASVNWLKANGSKKVGVTGFCMGGALSIASSVLVSEVDAAVAFYGVPSSQLADPAQVKAPVQAHFGELDSFVGFSDVTAAKALEEKLKASGVPHEVHIYPGNAHAFMNRSTEGIQRRKHMGMPDEDEAAVQLAWSRFETWMTRYLSIWDAYCEI* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00620 250 Gene3D alpha/beta hydrolase 5 241 IPR029058 -
Lapu5g00620 250 SUPERFAMILY alpha/beta-Hydrolases 9 241 IPR029058 -
Lapu5g00620 250 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 12 241 - -
Lapu5g00620 250 Pfam Dienelactone hydrolase family 21 240 IPR002925 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00620 Lapu-Chr5 5752616 5755972 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00620 K01061 - gmx:100790249 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00620 5 5752616 5755972 Lapu5g00620 5 5752616 5755972 ECH
Lapu5g00620 5 5752616 5755972 Lapu11g00251 11 5468483 5472423 PCT