Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00555 ATGGTAAGTTTCATAAAGAAGAGTATGCTCTGTCTGTTTGGAGCAATGGTGATTCCAATAGCAGTGGCATTGGTGGTGATTCTAATTGGGTGGGTTTATAAGGCCATAAAACCACCAGCTCCTGAAATATGTGGATCCATTGGTGGTCCTCAAGTTACTTCACCCAGAGTGAAGCTCAGTGATGGGAGGCATTTGGCTTACCGAGAATTTGGTGTTCCAAAGGAAGAGGCTAGGTACAAGATCATTGTCATTCATGGATATAACAGCTTCAAAGACTCAACTTTACCAGTTTCTCAAGAACTTATTGAGGATCTTGGGATATATTTCCTCCACTTCGACAGGGCAGGTTATGGTGAAAGTGATCCACATTCATCACGTTCTGTGAAGAGTGAAGCTTATGATATTCAAGAACTGGCTGATAAATTGGAGATTGGTGAGAGATTTTACATAATTGGAATGTCAATGGGAGGTTACTCTGCTTGGAGCTGCCTAAAATACATTCCACACAGATTATCAGGAGCAGCTTTGCTGGCTCCATTTATAAGCTATTGGTGGCCCTCTTTTCCTGATAATCTTTTGAGAGAGGCATTTCAGATGCTACCTCGGTCAGACCAATGGACTTTTCGAGTTGCACATTACGCCCCTTGGTTGTTCCATTGGTGGATGACACAAAAATGGTTCCCTTCATTGACTTTGACAACTATGTTGTCTCCTGATGATATAGAAATCGTGAAGAGCTTGTCAGAACTCCCAAACACTGCTCAGGAGAAGATAACTCCGCAAGGTGAATATGAATCATTACACAGAGACATAATGAGTGCTTTTGGAAAGTGGGAATTTGGCCCAACTGAGATAGCAAATCCGTTCCCTGATAATAATGGTTCAGTTCACATATGGCAAGGCTTTGAAGATAGGATCATTCCCTATACATTGAACCGTTACATCTCTCACAAATTACCATGGATTTTTTATCACGAGCTTCCTCATGCAGGACATTTGTTTCTCTTCAAGAAAAATGAATGTGAGTCTATCATCAGAGCACTTGTACTCTCACCAGATATTTCAGAATAA 1071 0.4118 MVSFIKKSMLCLFGAMVIPIAVALVVILIGWVYKAIKPPAPEICGSIGGPQVTSPRVKLSDGRHLAYREFGVPKEEARYKIIVIHGYNSFKDSTLPVSQELIEDLGIYFLHFDRAGYGESDPHSSRSVKSEAYDIQELADKLEIGERFYIIGMSMGGYSAWSCLKYIPHRLSGAALLAPFISYWWPSFPDNLLREAFQMLPRSDQWTFRVAHYAPWLFHWWMTQKWFPSLTLTTMLSPDDIEIVKSLSELPNTAQEKITPQGEYESLHRDIMSAFGKWEFGPTEIANPFPDNNGSVHIWQGFEDRIIPYTLNRYISHKLPWIFYHELPHAGHLFLFKKNECESIIRALVLSPDISE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00555 356 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 21 350 - -
Lapu5g00555 356 Pfam Alpha/beta hydrolase family 81 336 IPR000073 -
Lapu5g00555 356 Gene3D alpha/beta hydrolase 50 348 IPR029058 -
Lapu5g00555 356 FunFam Alpha/beta-Hydrolases superfamily protein 51 349 - -
Lapu5g00555 356 SUPERFAMILY alpha/beta-Hydrolases 50 335 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00555 Lapu-Chr5 5043249 5046353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00555 - - vra:106758725 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00555 5 5043249 5046353 Lapu5g00555 5 5043249 5046353 ECH
Lapu5g00555 5 5043249 5046353 Lapu11g00326 11 6288286 6290688 ECH
Lapu5g00555 5 5043249 5046353 Lapu11g00326 11 6288286 6290688 PCT