Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00534 ATGAATATGTCAGATATAATATCTTGCTTCAATGAGAACGCAGTGAATGTGTCACACTCTTCATGTTCTAGCTACTCAAACAACGCGTGCATATCTCCCAGTGTTACACCTTCAACACAAAACTCAGTGTCCTCTGTCTACAAAACCACCCTCTCCAACAAAAAGCAGGTTCTCATCACAGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCACCATAACCTTCGGCGAAGAGAACCCTTTGGCACCATCTTTCAGGCTCAACACAAATTCACGGTTTTTCAGGAAAAAGAAAGGAAGCAAGGTCCTAGAATTTGAAGACTCTAAGGTTGAAGTCTTCTGGGACCTCTCGAAGGCCAAGTACGAGACTGGTCCCGAACCTGTTGAAGGGTTTTGCGTGGCGATTCTCGTTGATGCAGAAATAGGCCTTGTGCTGGGAGAAGAGGATGTGGTGAAGAAGTTCAAAACAAGAACCCTTTTGGCCAAAGTGTCGCTGTTGTCACGGCGTGAACATTGCTCTGGCAACGCCGTTTACGCCACCAAGGCTCAGTTCTGTGACACTGGAACTTGGCATGACATTTTGATCCGATGCAGTGGGGAGAATGAGGGCCTCAAGGCTCCTGTTTTGTCCGTTTGCATTGATAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACGATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAATCCTGCTTCTGGGTATGCAGTGTTCATGTTCAGGACCAGAAGTGGCTTGGATAGCAGATTGTGGTTAGAGGAAAAGATTACACAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATGA 903 0.4585 MNMSDIISCFNENAVNVSHSSCSSYSNNACISPSVTPSTQNSVSSVYKTTLSNKKQVLITVTWCKSHSNQGLTITFGEENPLAPSFRLNTNSRFFRKKKGSKVLEFEDSKVEVFWDLSKAKYETGPEPVEGFCVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKITQKDKDRVEFSLLIYACKST* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00534 300 PANTHER EXPRESSED PROTEIN 6 298 IPR008586 -
Lapu5g00534 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00534 Lapu-Chr5 4843821 4845354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00534 3 299 EF-hand Containing Proteins AT5G28150 38.944 3.53e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00534 - - gmx:100798692 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00534 5 4843821 4845354 Lapu5g00534 5 4843821 4845354 ECH
Lapu5g00534 5 4843821 4845354 Lapu11g00366 11 6703772 6705191 PCT