Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00496 ATGAAGCTTCTGCACAAACCAGGGAACAAGCCTGTACTAGAGAAAAACAGTTTCTTCCATGCATATTACAAATGGGTTCTTTGGCTCTCTCTCTCCCTCTATTTCTTCACTTCCTATGTCATCACCAGCAACCCCAACAACAACACACCAAACTCTCCGGACACATCGTCCCACGTTTCGAACTCCGAATCCCATGTTGTGCCTCGTACCCCTAGCCACATCACAACCAACTCTCTAGGGGTGCTGAAGAATCTGAAGATGTTCGTGTACGAGCTTCCTCCCAAGTACAACACCGATTGGCTCGCGAACAAGAGGTGTAGCAATCATTTATTCGCGTCGGAAGTGGCCATCCACAGGGCACTGTTAACTAGCGAGGTTCGCACGTTTGACCCATATCAAGCTGATTTCTTCTTCGTCCCCGTTTACGTTTCTTGCAACTTCAGCGCCGTTAACGGCTTCCCCGCGATTGGGCACGCGCGCTCCCTTATTTCCTCCGCCGTCAATCTCGTGTCCACTGAATATCCTTTCTGGAACCGCAGCAAAGGATCTGACCACGTCTTCGTCGCTTCCCACGACTTCGGCGCGTGTTTCCACACCCAGGAGGATGTGGCCATTGCTGATGGAATACCCCAATTTTTGAAGAATTCGATTGTGTTGCAGACATTCGGCGTTGTTCACAGGCATCCGTGTCAAGAAGTGGAGAATGTGGTGATACCGCCTTATGTTTCGCCGGAAAGTGTACGGAGGACGCTGGAGAATCTTCCAGTTAACGGACCGCGAGAAATTTGGGCGTTCTTCCGTGGGAAAATGGAACTGCATCCTAAAAATATCAGTGGACGGTTTTACAGCAAGCGAGTGAGGACGGAGATTTGGCGCAAGTTCAACGGTGACCGGAGGTTTTACCTGCAAAGGCACAGGTTTAGCGGTTACCAGTTAGAAATTGCTCGCTCGGTGTTCTGTTTGTGTCCGTTAGGGTGGGCTCCGTGGAGTCCGAGGTTAGTGGAATCTGTGGCGTTAGGTTGTGTGCCGGTTATTATTGCGGATGGGATTCAATTACCGTTTTCCTCGAGCGTGCGTTGGTCAGAGATATCGGTGACGGTGGCGGAGAGGGACGTGGGGAAGTTGGGGAAGATACTTGAGCGCGTGGCGGCGACGAACCTGAGTGATATTCAGAGGAAGTTGTGGGACCCGAGGACGAGGCGGGCCCTGCTTTTCAACAAGGAGATGGAGTATGGTGATGCCACGTGGGAAGTTCTGGTTAGTTTGAGGGAGAAGCTAGGTAGGTCTTACCGAAGAAGGTCTTTGGTTAATGGCGAATTACGGAGTGACACTTAA 1335 0.5109 MKLLHKPGNKPVLEKNSFFHAYYKWVLWLSLSLYFFTSYVITSNPNNNTPNSPDTSSHVSNSESHVVPRTPSHITTNSLGVLKNLKMFVYELPPKYNTDWLANKRCSNHLFASEVAIHRALLTSEVRTFDPYQADFFFVPVYVSCNFSAVNGFPAIGHARSLISSAVNLVSTEYPFWNRSKGSDHVFVASHDFGACFHTQEDVAIADGIPQFLKNSIVLQTFGVVHRHPCQEVENVVIPPYVSPESVRRTLENLPVNGPREIWAFFRGKMELHPKNISGRFYSKRVRTEIWRKFNGDRRFYLQRHRFSGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIQLPFSSSVRWSEISVTVAERDVGKLGKILERVAATNLSDIQRKLWDPRTRRALLFNKEMEYGDATWEVLVSLREKLGRSYRRRSLVNGELRSDT* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00496 444 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 69 402 IPR004263 GO:0006486|GO:0016757
Lapu5g00496 444 MobiDBLite consensus disorder prediction 47 72 - -
Lapu5g00496 444 Pfam Exostosin family 83 381 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00496 Lapu-Chr5 4433624 4436154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00496 K20889 - gmx:100807050 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00496 5 4433624 4436154 Lapu5g00496 5 4433624 4436154 ECH
Lapu5g00496 5 4433624 4436154 Lapu11g00412 11 7265020 7267647 PCT