Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00473 ATGGAGAAAGAACCAAAGATGAAGCAATCCAAGTTCAAGAGGATTTGTGTCTTCTGTGGCAGCAGTCCAGGGAACAAAACTACTTATAAGGACGCTGCTATTGAGCTTGGAAGGGAATTGGTGTCAAGAAATATTGATCTAGTATATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACGAGGGTGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCCAAACGTTCTGATGCCTTTATTGCCTTACCTGGTGGCTATGGGACACTTGAGGAACTCCTGGAAGTGATAACGTGGGCTCAACTAGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATACCTTTCTGTCTTTCATTGACAAAGCAGTGGAGGAAGGGTTCATCAGTCCCACTGCTCGCCATATAATTGTATCAGCACCAACACCTAAAGAACTTGTCAAAGAGATGGAGGAATATTTTCCACAACATGAAAGAGTTGTCTCCAAGCTAAGCTGGGAACGTGAACAGCTACATTAG 630 0.4492 MEKEPKMKQSKFKRICVFCGSSPGNKTTYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYEGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKEMEEYFPQHERVVSKLSWEREQLH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00473 209 Gene3D - 2 189 - -
Lapu5g00473 209 NCBIfam Rossman fold protein, TIGR00730 family 13 190 IPR005269 GO:0009691|GO:0016787
Lapu5g00473 209 PANTHER LOG FAMILY PROTEIN YJL055W 2 208 - -
Lapu5g00473 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lapu5g00473 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Lapu5g00473 209 FunFam CASP-like protein 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00473 Lapu-Chr5 4109253 4113039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00473 K22522 - gmx:100811156 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00473 5 4109253 4113039 Lapu5g00473 5 4109253 4113039 ECH
Lapu5g00473 5 4109253 4113039 Lapu11g00441 11 7728826 7733493 PCT