Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00467 ATGTTTTGGAAGCTTGCATCTCTTTCTGCTTCCTCCCCCGTGGAGGCAATATTAGACAAGGATAATTTCACCTTGGAAGAGCTTTTGGATGAAGAGGAAGTGATCCAAGAATGCAAGGCCTTAAACAGTCGCCTTATCAACTTTTTGAGAGATCAAACCCAGGTTGAGCAATTGTTACGATACATTATTGAAGAACCACCAGAAGATGCTGAGAATAAACGAGCCTTCAAGTTTCCATTCATTGCCTGCGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTTGATGACGAAGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCTAATCGCTCACATAGTGCCTTGTTGGCAGGCTACTTTAGTAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTTCCACTGATGAATTACGTTCAAGCCCATCAGAATGTTTTCCGTCAACTGGTTGATTTGATAGGAATCACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATGTGTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACTTGCTTGAGATGATTATTGATAAATTGAGTCCATCTAGTCCTCCCGAAGTTCATGCCAATGCTGCTGAAACATTGTGCACAATAACTAGAAATCCCTCATCTACTCTAGCAATTAAACTTTCAAGCCCAAGTAATGTTGCAAAAATATTGGATCATGCATTGGAAGATTCACAGTCAAAGTCTAGCCTTGTGAACTCGCTTTCAGTGTGTGTTTCTTTGTTGGATCCCAAAAGATCTGCTATATCATCTCCTCTTTTTCATTCCTTTCGAACTCAACACATGTATGAGCCACCAATTCCTGTAAACCCAGACACAATTGGTGCTATGCTACCTAAACTCGGTGAATTGCTTATGCTTTTGAATGTATCATCCGATGAAAAAGTGTTGCCTACAACATATGGAGAATTGAGACCTCCACTTGGGAAGCATCGATTAAAGATTGTTGAGTTCATTGCCGTCCTTCTGAAAACTGGAAATGAAGTGGCAGAAAAAGACATGGTCAATTCAGGAATCATTCGACGAGTCATTGACCTTTTCTTTGAGTATCCATATAATAACTCATTACACCATCATGTAGAAAGTATCATACTATCATGTTTGGAGAGTAAAGCTGATGCCGTTGTTGATCATCTTCTTCGGGAGTGTGATTTAATTGGAAGATTTCTCCAAGCAGACAAACATTCTATTCTATCTGCTAACAAAAATATGCCAACAGTACTTGCTCCTGGTAAACAGGCACCACGGGCAGGGAACATTGGGCATATTACTCGAATTGTTAACAAACTTGTTCATCTTGCACATAATCGAAGCCTCATACAAACATGTCTTCAGGAAAACAGTGAGTGGAATGAGTGGCAAACATCAGTTCTTCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTACAAGATAGGATGAGGGATAGTGATGATGATGACCTTCATGACAGGGACTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAGGCTTTTAGATATAAAATTTATGGGAATGAGGATAATGAGGAGGAACGTGGCAACCTTGATCGAGATGATGAGGATGTCTACTTTGATGATGACTCTGCTCAGGTAGTCATATCATCCCTCAGACTCAGTGATGATCAAGGGAGTAGTCTGTTCACAAACTCCAACTGGTTTGCATTCCAAGATGAGAGAATTGGTAATGCAACTGGGGGCACAACATCGTCTGAGATGATGGATGAGATAAACTTGAATGGTGCTGCAAATGGTGGTAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAATTGGCTGAAAGCAAAAATAATCTCAATGGTACATCTAACTCAAGCACAAACTTAAATGGTATAACTGGCAGTGATTCCATGAATGGAGACGCCTTGAACTTTGAAAGCAAAAAGGCAAGTGCTTCACATGATATGGGATTCTTCAGGTTTGAGGCATCGGACAATGAAGAGTTGTTTCAGGGCAGGCCTTTTCCAGAGTGGGTGGGATGGGGTGAACCTTCAGATGTGCAGGATGCCGGCTCAAGCATGAATCCATTTGTGGACCATGATGATTCTTCTGGTAGCAACCTTTCTACCAAACCTCAAATAGGTAACCCAAATCCCGGTTCTCCTTCAAATGTGGACTCTGTACCTTCAAACAGGTCACTACTAACCCCTAAAGATTCAATTGATGGGTGTGCTGACTTGAGTCAAAGATCAGTAGCAGTGCCATCACTCTTCGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACCGAGAAGGCTATGGAACAGGCTTTGAAAGAAGGGATAGTTGGAGAGGCGGGACCATTGAAAAGAAACATGGTCTCTAAAGTGCCAGAAAAAGAAAGTTCTGATGAGGGTGGTCCTGGAATAAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAGGAAGTTGCTGTTCTGGAGTGA 2562 0.4145 MFWKLASLSASSPVEAILDKDNFTLEELLDEEEVIQECKALNSRLINFLRDQTQVEQLLRYIIEEPPEDAENKRAFKFPFIACEIFTCEIDVILKTLVDDEELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYHNFIDVMQWLAESNLLEMIIDKLSPSSPPEVHANAAETLCTITRNPSSTLAIKLSSPSNVAKILDHALEDSQSKSSLVNSLSVCVSLLDPKRSAISSPLFHSFRTQHMYEPPIPVNPDTIGAMLPKLGELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKDMVNSGIIRRVIDLFFEYPYNNSLHHHVESIILSCLESKADAVVDHLLRECDLIGRFLQADKHSILSANKNMPTVLAPGKQAPRAGNIGHITRIVNKLVHLAHNRSLIQTCLQENSEWNEWQTSVLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEERGNLDRDDEDVYFDDDSAQVVISSLRLSDDQGSSLFTNSNWFAFQDERIGNATGGTTSSEMMDEINLNGAANGGNSSDDEVVVGEDEELAESKNNLNGTSNSSTNLNGITGSDSMNGDALNFESKKASASHDMGFFRFEASDNEELFQGRPFPEWVGWGEPSDVQDAGSSMNPFVDHDDSSGSNLSTKPQIGNPNPGSPSNVDSVPSNRSLLTPKDSIDGCADLSQRSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVSKVPEKESSDEGGPGIKEFNDANYWRVDQEVAVLE* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00467 853 MobiDBLite consensus disorder prediction 817 838 - -
Lapu5g00467 853 MobiDBLite consensus disorder prediction 710 759 - -
Lapu5g00467 853 MobiDBLite consensus disorder prediction 697 764 - -
Lapu5g00467 853 MobiDBLite consensus disorder prediction 638 657 - -
Lapu5g00467 853 MobiDBLite consensus disorder prediction 613 657 - -
Lapu5g00467 853 Gene3D - 94 422 IPR011989 -
Lapu5g00467 853 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 817 IPR007587 GO:0019903|GO:0043666
Lapu5g00467 853 SUPERFAMILY ARM repeat 163 460 IPR016024 -
Lapu5g00467 853 Pfam SIT4 phosphatase-associated protein 358 490 IPR007587 GO:0019903|GO:0043666
Lapu5g00467 853 Pfam SIT4 phosphatase-associated protein 131 354 IPR007587 GO:0019903|GO:0043666
Lapu5g00467 853 MobiDBLite consensus disorder prediction 818 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00467 Lapu-Chr5 4022005 4032908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00467 K15501 - gmx:100802276 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00467 5 4022005 4032908 Lapu5g00467 5 4022005 4032908 ECH
Lapu5g00467 5 4022005 4032908 Lapu11g00446 11 7783380 7795459 PCT