Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00378 ATGGGCACACCTTTGTTCCATGATTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGCAAAAATTCAAGACTGCTAGGTTAGCTCTCACTGATGTTACTCCAGCAGAACTCATGACAGAAGAAGTTACCAAAGGAAATCCATGGGCCCCAGATTCTCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTTGAAGATTATTGGAGGATTGTAGAGATTCTACACAAAAGACTCCTTAAATTTGAGAAGAAGAATTGGAGGGCATCTTACAATTCTCTGATTGTGGTGGAACACCTGTTGACTCATGGACCGGAAAGTGTTGCAGAGGAATTTCAGAGTGACAAAGATGTAATTAGCCAGATGAAAGGCTTTCAGTATACTGATGACAGTGGGTTCAATTGGGGTCTAACTGTTAGAAAGAAATCAGAACGGATTTTGATACTGCTGGAAGAAGGAACTCTCCTTAAGGAAGAAAGAAACCGTGCTCGGAGGCTGTCCAGAGGAATTCAAGGTTTTGGAAGTTTCAGCCAAAGGTCAACTCTAGCACAAGGAATTCTGCATGAAAAATCATTGCCAACCACATTTGACAGATCTAAATCTGAATTCAACAACAATGACAATGAGGAAAACCAGTCATTTGGTTCAAACCATTTTCTGGACACAGCAGCAGTTAAATCTGCTAGTCCTCGTCATACGGGAGGAATTTTCAAATCTCATGATGATAGTGTAGAGCCTGAGAGCTACTTGGATTATCAGGGAAACACTCAGATGCATCAGAAATCTGAGACAATCTGTAAAGAAATCACGACTAGCAAGGAGGAATTCCATCTATGGAACTTGAAAGGGGAATCCAATCCACTTTTGGATGGCAACCAAGAGAATGATTCCAGACGTGGGATATTCAGAGCCGAAGATGATCATCCCTTTAATTCCACAAAAATGCATTCCAATTCTTCTCTTCTTCCTTCTGGATGA 975 0.4092 MGTPLFHDFKKQASFFLKQKFKTARLALTDVTPAELMTEEVTKGNPWAPDSPTLRSISRAAFELEDYWRIVEILHKRLLKFEKKNWRASYNSLIVVEHLLTHGPESVAEEFQSDKDVISQMKGFQYTDDSGFNWGLTVRKKSERILILLEEGTLLKEERNRARRLSRGIQGFGSFSQRSTLAQGILHEKSLPTTFDRSKSEFNNNDNEENQSFGSNHFLDTAAVKSASPRHTGGIFKSHDDSVEPESYLDYQGNTQMHQKSETICKEITTSKEEFHLWNLKGESNPLLDGNQENDSRRGIFRAEDDHPFNSTKMHSNSSLLPSG* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00378 324 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Lapu5g00378 324 MobiDBLite consensus disorder prediction 300 324 - -
Lapu5g00378 324 SMART enth_2 32 159 IPR013809 -
Lapu5g00378 324 CDD ENTH 34 150 - -
Lapu5g00378 324 Pfam ENTH domain 32 153 IPR013809 -
Lapu5g00378 324 Gene3D - 28 175 IPR008942 -
Lapu5g00378 324 PANTHER EPSIN/ENT-RELATED 17 217 - -
Lapu5g00378 324 SUPERFAMILY ENTH/VHS domain 12 159 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00378 Lapu-Chr5 3139483 3141665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00378 K12471 - gmx:100812797 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00378 5 3139483 3141665 Lapu11g00574 11 9057698 9059451 PCT