Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00352 ATGCCTGAACGTGCGTGCAAACATACTGAAACTAAAAGTTCTCCTTGCAATGTCGGTACCGTGGAACAATTCCTCCGAGGTCCAGGAGCTGATTCTTCTAGGATGTCACCAACCTATTCTTCCAACTGCTCTTCCCCTTGCTCTCCAATGAAGCATCAGGACATGGAGGAAGACCATGGCCTCTATCAGAAGAAATCAGTCCTCACCAAAGTGAAGCAAAAGGCCAGGAAATTCTGCAACAGCCTCAGCAAGAGAAGAATGGAGGACGACAATATCACACCCTCTTGGGGTGTTACGTTAGAAGATGACGAGGAGGAGGAAGAAGAAGAAGAAGACGCTGAATACCTTGGAGCTCCTATGTATGAATCGGAGCTGGCACCTGAGGCATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAAGCATGTTTTGCATAACACTATCACTCTAGGAATGCAGCAAGATCAAGATCAAGAAAAGCCACGTGCTGCTGTCAATCGAAAGCTCACGTCAACAACTCAACCTGATAGTACAACAACAGCAGCTCCAAACCTGGCCTCTGAAACCTTAGCTCAGAAACTGATACCTGTGTATACTGGAGGATCGGTTGCAGCTAATTCTATATCCTCCAAAATTCAAAATGCAGTTTCCAAAAACCCTCTTGTAGCCAACAGCATGCCCTCCCAAAATGCATCTGTTTCATCATCTCCGTTGCAAAATTTACTTTCCTCATCTGCTTCACAGAGTAGGAAGAATACAAGCCAAAACGGTGCTTCAGTCAAAGAGTATATGTTGAACAAGTCTGAACAAGAGGATGGTGCCAAAACTGTGTCTCCAAAGCAATATTTATCGTCTTCATCTGCTTCAATGAGTGGGAAGAATACACGAAAGAGTATTTCATTCAAAGATTCTTCGATGAACAGGTCTGAACGAGGGAATGATGCCAGAACTGTGACTCCATTGCAAAAATCATCATCCTTATCAGCTGCTTCAATGAGAGAGAGAAACACAAGCCAAAGGAATGCTTCAGCCAAAGATTATTCAATGAGCGAGTCTGAGCCGAGGGATGATGAGAAAACTGCATCTCAGCTTCAGGCGATATCTGAAAGAACAGGTCCAAGCAAAACTTCCAGTAATGCAGGTGTGATGGAGAAGGTGAGAGGAGCTGTAAATTCATTGCTCGGGAATGAGGAGCCATCACAAGAATATGGAGTCAAAATTCCTACTACACGCACTTCATCACAAACTCAACAAGGGAATCAAAGTATAAAGCTTTGTTCCTGGTTGCAAGTTGAGACAAATCAGCATACATTGGTGGAAATGGAATGCAAAGGTAGCTTGATGGGAAGGAGAGGAGGAGGGTGCCCTACCAGGCTACAGAAGCATGCACCTGTCTCTCTTGACATTGATAAGGTTCTCTATGATCGTCCCTCTAACCCTTTTGGAGAGGTTTCAAAGGCCATACCATTGTTATCTCCACTTATGTCTTGCCATCGGCCCATTTATGAAGATATCACTGTTCATGTTGGAACATCGGACAATATTGAGAATAGCAATGACAAGTGTGGCACGAACGAGGATAGGACTCGATACACTGGTTGGAAACATCCAGCTATGGTCTCATTTCCTGACAGTTCATCATCATCTTTCTGTAGTTTGTTCCAAAAGCAATGTGTTTGTATCAATCATGCCCAATAA 1716 0.4382 MPERACKHTETKSSPCNVGTVEQFLRGPGADSSRMSPTYSSNCSSPCSPMKHQDMEEDHGLYQKKSVLTKVKQKARKFCNSLSKRRMEDDNITPSWGVTLEDDEEEEEEEEDAEYLGAPMYESELAPEAYKENARQHPRANPVISEKHVLHNTITLGMQQDQDQEKPRAAVNRKLTSTTQPDSTTTAAPNLASETLAQKLIPVYTGGSVAANSISSKIQNAVSKNPLVANSMPSQNASVSSSPLQNLLSSSASQSRKNTSQNGASVKEYMLNKSEQEDGAKTVSPKQYLSSSSASMSGKNTRKSISFKDSSMNRSERGNDARTVTPLQKSSSLSAASMRERNTSQRNASAKDYSMSESEPRDDEKTASQLQAISERTGPSKTSSNAGVMEKVRGAVNSLLGNEEPSQEYGVKIPTTRTSSQTQQGNQSIKLCSWLQVETNQHTLVEMECKGSLMGRRGGGCPTRLQKHAPVSLDIDKVLYDRPSNPFGEVSKAIPLLSPLMSCHRPIYEDITVHVGTSDNIENSNDKCGTNEDRTRYTGWKHPAMVSFPDSSSSSFCSLFQKQCVCINHAQ* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00352 571 MobiDBLite consensus disorder prediction 370 387 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 355 369 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 33 49 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 232 269 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 27 57 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 317 354 - -
Lapu5g00352 571 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 298 425 IPR037491 GO:0009737
Lapu5g00352 571 MobiDBLite consensus disorder prediction 99 117 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 232 389 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 89 192 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 277 308 - -
Lapu5g00352 571 MobiDBLite consensus disorder prediction 171 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00352 Lapu-Chr5 2928974 2933876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00352 - - vra:106758277 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00352 5 2928974 2933876 Lapu11g00597 11 9249457 9250629 PCT