Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00326 ATGGCTGCAACTGCAACGGCAAAAAGTTTACAAAACCATAACAGCCAAAGCATCAATGGCAACAACCCCGACATAACAAGGGAAGAAATCGAAACCGCCATAGCCAAAGCAGTGGAACTAAGGGCCCTTCATGCTGCATTAACACAAGGAAGTAGCCCAGGCACAACCAATGTTAGATTCCCATCACCTTCTCCCGCTTCTCACTTCTCTGCCCAAGATTACCCTGTTTTCACACCAAGTTATGAAGATGAGGCACATCAGAACCCAACAAGGAGCAGAACAATATCAGAAAGTTGGGATGAGAATGGGGTAGATGGAGTGAACAGCATGGCCCCCTTAGATTACAAGGAGAAATCAAGTTCAAGAAAGGGGCTACCTTTTGGATTTGGCAATCATGACTCTCACATGTGTCCTGCTGATGATAGTAAATCTGTGAGTGGTTCTTGTGCAAATCATATCACTGTTCTCCAAACATCGCCTGCAAATGACTACTTCAAATCCAGGAGGAGAAACAGTTCGGGGGACTTGAGGCCCTTGTCTTCCTGCAATAGGTGCAATCCTGCCGTCATAACTACTGAATATGAAAACACAAGAAACAATAGGAGCTCCAATATTGTTGTTCCCCTCACAGATTCTCATGCTTCTTTTCAGACCCAACCAAAAAATAAAGGGGTGATTTCCTGGTTGTTCCCTAAGTTCAAGAAGAAGCATAAGAATCTGAGTTCCCCAGCTAGAACAGAATCTGAGGAAGTCTCTCAGGTTCTCAAGGACATGAGAGTAATGTCAGTTGAGGCACTGAAGAGGGAACTGATGGAGGCAAATGACAGTAGAGATGCTGCCTTGATGGAAGTTTCTGAGATGAGATCTTCACTGGGGGACCTGAAACAAAAGCTTGAGTATTTGGAGAGTTACTGTGAAGATTTGAAGAAGGCTTTGAGGCAAGCAATTCTCACGAAAGAAGCCACACATTCTGAAAAGTTTAACAACTCTCCCCACAGAGGAACACCCTTTGATGGGAATGGGGAAAATTTGATGCCTGTGGGTGAGGACGTTATGGTAGAGGGCTTCTTGCAGATAGTGTCAGAATCAAGGTTATCAGTGAAGCAATTCTGCAAGACCCTTATATGCCAGATTGAAGAAACCGATCATTCTTTGATGGACAACTTGAACTTGATCCTCCAACCATATAGACTCTCCTTGAATTCCAAATACTCAAAGGCAGTTCTATACCATTTTGAAGCCTTCATAAACCAGTCCTTCTACCAAGACTTCGAGAACAGTGTGTTCCAAAAGAATGGCTGCACAAAATTCTTAGACCCTCGACAGGATCGCCAAGCACAATTCTCATCGTTTGTTGCACTTAGAAATTTGAGCTGGAACGAGGTGCTCAGAAAGGGCACTAAGTATTACAGTGAAGAGTTTAGCAAATTCTGTGACCAGAAAATGAGTTGCATCATCACTACACTGAATTGGACGAGGCCATGGCCTGAACAACTCCTTCAGGCTTTCTTTGTGGCAGCAAAGTGCATATGGTTGCTACATTTGCTGGCCTTTTCTTTCAACCCTGCATTGGGAATTTTAAGGGTTGAAGAGAATAGAATCTTTGATCCTCACTTCATGGAAGATCTGGTTGCTGATAGACAGAGATCACAAGGTCCAAGCCGTGTTAAGATCATGGTGATGCCAGGGTTCTATGTTCAAGATAGGATCTTGAGGTGTAGAGTTATTTGCAGGCATAAATCTGCACCCTAA 1752 0.4372 MAATATAKSLQNHNSQSINGNNPDITREEIETAIAKAVELRALHAALTQGSSPGTTNVRFPSPSPASHFSAQDYPVFTPSYEDEAHQNPTRSRTISESWDENGVDGVNSMAPLDYKEKSSSRKGLPFGFGNHDSHMCPADDSKSVSGSCANHITVLQTSPANDYFKSRRRNSSGDLRPLSSCNRCNPAVITTEYENTRNNRSSNIVVPLTDSHASFQTQPKNKGVISWLFPKFKKKHKNLSSPARTESEEVSQVLKDMRVMSVEALKRELMEANDSRDAALMEVSEMRSSLGDLKQKLEYLESYCEDLKKALRQAILTKEATHSEKFNNSPHRGTPFDGNGENLMPVGEDVMVEGFLQIVSESRLSVKQFCKTLICQIEETDHSLMDNLNLILQPYRLSLNSKYSKAVLYHFEAFINQSFYQDFENSVFQKNGCTKFLDPRQDRQAQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPALGILRVEENRIFDPHFMEDLVADRQRSQGPSRVKIMVMPGFYVQDRILRCRVICRHKSAP* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00326 583 Coils Coil 263 283 - -
Lapu5g00326 583 MobiDBLite consensus disorder prediction 48 74 - -
Lapu5g00326 583 MobiDBLite consensus disorder prediction 48 104 - -
Lapu5g00326 583 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 25 581 IPR042316 -
Lapu5g00326 583 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00326 Lapu-Chr5 2704566 2706931 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00326 - - gmx:100786740 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00326 5 2704566 2706931 Lapu5g00326 5 2704566 2706931 ECH
Lapu5g00326 5 2704566 2706931 Lapu11g00645 11 9634130 9637242 PCT