Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00280 ATGGCGAATCTGGTTCCGGGGGTGCTTCTGAAGCTTCTGCAGCACATGAACACGGATGTGAAGGTTGGTGGTGAGCACAGGTCTTCGCTGTTGCAGGTTGTAAGCATTGTTCCGGCACTCGCAGGGGGCGAGCTTTTCCCAAATCAAGGTTTTTATCTCAAAGTCTCTGATTCATCTCATGCTACTTATGTTTCTCTCCCTGATGAACATGATGATCTCATTCTCAGTGATAAGATTCAGTTGGGTCAGTTTGTGTTTATTGATCGTTTGGAGGGTGCTTCTCCCGTCCCTATTCTGAGAGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTTGGAACCCCTGAGGATATTGTCGCAACTCATTCCCTTGCTTTCCTTGACAATGGTAAGGACAAGAATGGGGTTTCTTCTGGTGTTCCTGACATGGATAGATCGAAGTCTCCGAGGAAAGTTTACAGTGGTGGGGTTGGAGAGAAGGAGAAGAAAGAGAGAGTGAGATCAAATGGTGGTGGTGGGAGTGGTAAGGAGGAAGTACAATCCAGCAAGACTAGTGCTGTTTTGGGTAGGGGCAAATCTCAGTCTCAGCCTCAGCCAGTGAAGCCTCCACTGAAGATTGAGGTGAAGAAGGAGTCCTTGACTAGATTGAGGTCAACCAATTCGCGGTCCATTCCTTCGTCCCCAAGTAGTTGCTACTCGTTGCCGACCTCTTTTGAGAAATTTGCCAATGGGGTCCGGCAACATCAGGCTAAGGTTGGGGCTAAGGTGGGAGTGGTGGAGACGGGAAAGTTGGTTCGTGGGGCTAGTAGTCCGGCTGCTAAGAAAATTGTTAATCCGATTAGGAATTTGGTGCAGGGAATTGAGCTGGGGAGTAAGGCTCTGAGGAAGAGCTGGGAAGGGAGTATGGAGGTCAAGACTAGAGAGTCCTCCAAAACTAGGGCTGCGACCAAGTTTGATACCAAGTCTGAACTAAGTATTCCTAGGAGGAGAAGCATTTCAGGCGAAAAAGGGCCATCAAAAGAGGAGGGGAAGATCCAACCACCAACAAAGCCCTCTAAGGAACAACATAAGACTCAAACGTCTACAAAGAAGGTTAATGCTAACGGAACTACAGCTGAACCAGAAAAGTCGATCAAGCAAAGAACTTCCATTGGAAAGAAAGCAGGGGAAGTTTCTAATAGCGGACTCCCTGGAAATTTGGTCAAAGTTTCTCTAAGTAATAGGAAAGTGACAGATGCAACTGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGCTTGGAAGGGAAGTAATGATGCAGAGAGATGCTGCACAGATAGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCAGAGAGTTTACTGCAATGTCTAAGAACATATTCAGAGCTAGCTAATTCTGCTAAGGAACATAACCCACAGCCAGCAGTTGAGCAGTTTTTAACTCTTCATGCTAGCTTGAATAGTACCCGGACAATTGCTGAATCTTTAACAAAACCCATTCCAGATTGTTCATCTCCAGATTATGAAAAGGGTACAGCGGAAGAAGTACTAAAAGTAAAATCAGATAGACAAAAGCAGGCTGCTGCATGGGTCCAGGCAGCCTTGACCACCAATCTGTCGTCCTTTGCTGTTTTTACAAGAGAATCTCAAACATCCAGGCCTCCAGCTTCAAGCAGCTCTCAAAATCAAAAAACTGTTGTGAGAAGTCAACCTATGTTAGTTATACACAATTCCAGTGAAGATGCTTCATCAAAAGTTCATGCAAAGACCCGTCTGACAGCTAATTCCAAGCATGCCTCACAAGGAACTCTTCGCAAACCAGGTGATGGGTTATTAAATGGGCAGAAGCAGCTAGTCCAACCACCCTCTGAATGGGTTAGAGGAAATGGCCTCAGTGAGGTAGTTAATTTGGTCGAAATGTTGCAGTTACAATCCCGAGACTGGTTTTTGGGATTTGTTGAGAGGTTCTTAGACAGTGATGGGGACACTACCTTGTCAGATAATGATCAAATAGCAGGTATGCTCACTCAACTGAAGAGTGTTAATGATTGGTTAGATGAGATAGTTTCGAGTAAGGATGAGGGAGAATCATGCCAGATATCAGCAGAGACAATTGATCGGCTGAGGAAGAAAATATATGAATATCTTCTTTCACATGTTGAGTCTGCTGCTGCAGCACTCAGTGGTGGATCACAATCGTCACCTCAGATCCAAACAACACAGATTAAAGCCAAAAGGTGA 2247 0.4566 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFIDRLEGASPVPILRGVRPVPGRHPCVGTPEDIVATHSLAFLDNGKDKNGVSSGVPDMDRSKSPRKVYSGGVGEKEKKERVRSNGGGGSGKEEVQSSKTSAVLGRGKSQSQPQPVKPPLKIEVKKESLTRLRSTNSRSIPSSPSSCYSLPTSFEKFANGVRQHQAKVGAKVGVVETGKLVRGASSPAAKKIVNPIRNLVQGIELGSKALRKSWEGSMEVKTRESSKTRAATKFDTKSELSIPRRRSISGEKGPSKEEGKIQPPTKPSKEQHKTQTSTKKVNANGTTAEPEKSIKQRTSIGKKAGEVSNSGLPGNLVKVSLSNRKVTDATVQWASLPSSISKLGREVMMQRDAAQIAATEAMQEAAAAESLLQCLRTYSELANSAKEHNPQPAVEQFLTLHASLNSTRTIAESLTKPIPDCSSPDYEKGTAEEVLKVKSDRQKQAAAWVQAALTTNLSSFAVFTRESQTSRPPASSSSQNQKTVVRSQPMLVIHNSSEDASSKVHAKTRLTANSKHASQGTLRKPGDGLLNGQKQLVQPPSEWVRGNGLSEVVNLVEMLQLQSRDWFLGFVERFLDSDGDTTLSDNDQIAGMLTQLKSVNDWLDEIVSSKDEGESCQISAETIDRLRKKIYEYLLSHVESAAAALSGGSQSSPQIQTTQIKAKR* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00280 748 MobiDBLite consensus disorder prediction 548 583 - -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 130 203 - -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 295 400 - -
Lapu5g00280 748 PANTHER EXPRESSED PROTEIN 1 730 IPR010341 -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 590 604 - -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 548 617 - -
Lapu5g00280 748 Pfam Plant protein of unknown function (DUF936) 4 729 IPR010341 -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 174 200 - -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 361 378 - -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 298 360 - -
Lapu5g00280 748 MobiDBLite consensus disorder prediction 144 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00280 Lapu-Chr5 2296043 2301649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00280 - - gmx:100814047 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00280 5 2296043 2301649 Lapu5g00280 5 2296043 2301649 ECH
Lapu5g00280 5 2296043 2301649 Lapu11g00685 11 9970864 9976195 PCT