Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00225 ATGACCAACTACGGCGCAATCCCAACTTCATCTTCACCTTCCACCAACCTCGAGTTCATCTCACGCGCCAAGCAGCGTGTGAAGGAGGGGCTAGCCACGCGCCGTCCATGGAAGATCATGTTCAACCTCCACTCCTTCGGCCTTCCCGGCGGTTTCTCCGACGCCGTGGGGCGCGTGCGGGAGAACGTGGGTTACTTCCAGATGAACTACGCCATCGTGGTGCTCATCGTCCTCTTCCTCAGTCTCCTCTGGTATCCAATATCGCTGATCGTGTTCGTGGTGCTTATGGCGGCGTGGCTCTTCCTCTACTTCCTCCGCGACGAGCCGCTTGTCATCTTCGGCAGGATGATCAGCGACCGCGTCGTGCTCGTCGTCATGGCGGTGCTGACCATCGCGCTCCTCCTCCTCACCGGCGCCATCACCAACATCCTGGTGGCGCTCCTCATCGGAGTCGTCTTGGTGGTGGCGCACGCCGCCTTCAGAAGAACCGATGATTTGTTCTACGACGAAGAAGAGGCCAGTGCTCGCTTCGTTCCTCCTCCTCCTCATCCCGGTGCTCCTCTTTCTTGA 570 0.593 MTNYGAIPTSSSPSTNLEFISRAKQRVKEGLATRRPWKIMFNLHSFGLPGGFSDAVGRVRENVGYFQMNYAIVVLIVLFLSLLWYPISLIVFVVLMAAWLFLYFLRDEPLVIFGRMISDRVVLVVMAVLTIALLLLTGAITNILVALLIGVVLVVAHAAFRRTDDLFYDEEEASARFVPPPPHPGAPLS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00225 189 Pfam PRA1 family protein 31 171 IPR004895 -
Lapu5g00225 189 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 172 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00225 Lapu-Chr5 1850661 1851230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00225 K20359 - gmx:100788152 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00225 5 1850661 1851230 Lapu5g00225 5 1850661 1851230 ECH
Lapu5g00225 5 1850661 1851230 Lapu10g00481 10 7175798 7176538 PCT