Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00203 ATGCTGATCAGACAGGAAAAGGGTGTGAAGCCTGTTCTGCTTAAATTTGGTCTGGCTTTGGCTCTTTCATTTGCTGGATTTCTCTACTCACGCTTCGGAATCCGAAGAATCAAGCCCTCCAAGTCACGCAAGGGCGGTTCTTTCGGTCACGAGAGTGAAATTAATTTAGGAGGAGGTATAGGGGCAGCATTAAGTACTTGCAACACCATTTCAGAAGGAAATTTTCTATGTTCTGAAGATACTTGCACCGAAAGAGTGATAACTGGCAATTCTCCTCTTGCTCTCTCTCCTGACAGTACAAAAAATGGAGATAAAGATGAGTTCCTCCTACCTGAATTTAATGATCTTCTTAAGGTCGAAGACTATGGAGCCACAGTTGTCAGAAATTCTTTTAAAAAAGATATGGAAGCACCATGGTTAAAAGTATACGTAGATCCTGAGAAGGATGACTATGAGCAAGAGGTAACTCAACTCAGGAACATGATTAGAGTGCTTCAAGACAGGGAACAAAGTCTTGAGGTTCAACTGCTCGAGTATTGTGGTCTTAGAGAGCAAGAAACAGCAGTGATGGAGCTCCAAAATAGATTGAAAGCTAGTACTGTGGAGGTAAAGATGTTCAATCTGAAGATTAAGACCTTACAGTCGGAGAATTGGAGACTAAAGGAACAGGTTTCTGATCATGCGAAAGTGCTGGTTGAACTTGAGAATGCAAAAACACAAGTCAAATTGCTTGATAAGAAAATTAGCTATGAAGCTGAACAGAATAGGGAGCAGATCATAAGTCTTCAACAGAAAGTTTCCACGTTGCAAGACCAACAATGTAAAGATGCTGCCTTTGATCAAGATATTCAAATAAAGCTGCAAAAGCTAAAGGATCTTGAGACTGAAGCAGAAGAGTTGAGGAAATCTAATTTAAGATTGCAGATAGAAAATTCCCACTTAATTAGAAGATTGGATTCTACCCAAATCCTTGCTAATGCAGTTCTGGAGGACCCAGAGGTGGATGCTGTGAAGCAAGAACGTGAGTGTCTTAAAAAAGAAAACGTGCGCTTGATGAAGGAAATTGAGCAACTACATTCTGATCGATGTTCAGATCTTGAAGAATTGGTATATATGCGGTGGATAAATGCTTGCTTACGATATGAACTAAGAAATTATGAAGCCCCACCAGGTAAAACGGTTGCAAAGGACTTAAGTAGAAGCTTAAGCCCCACGTCTGAGAGGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGGAGCAGGGAACATTGTGGACTTTGATATAGATCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACTTTGGAGAGTGTGATGATTTTTCTTCTGCAGATTATTCATCTGCTGCCAAAACTAACACCACAAGCCAGACCAAGCTTTTAAGCAAGCTTAGACAACTGATACAAGGTAAAGATAGTAGTCATCACCATAGTCATGTTTCATCACAAGAAAAATACAGACATCAAGATAGCAATCCTCCACAGCAAAGTACTTCAACTGGAATTGAGGGTCTTAGGAGTGAGTTTGCAACTCCCATTGTCACATCTAGAACTTCCCTTGATTTCTCTAGGTTGACGAGTACGCAGGAAGAAGCAAATAGGAGAAATTCAGATAGTGCTTTCATGGGAAGCTCAAATAAATTCGGTGCACGTAAGAGAGGTTCCTTCTCAGATTCCTTAGGCTTGGACAAAAATAATTTGGAGAAATATGCAGAAGCTTTAAAGGACTATAGAGTGAGTGCTAGACATCAAAGACGTAGTAGATCAGCATCATGTAGTTAG 1812 0.4051 MLIRQEKGVKPVLLKFGLALALSFAGFLYSRFGIRRIKPSKSRKGGSFGHESEINLGGGIGAALSTCNTISEGNFLCSEDTCTERVITGNSPLALSPDSTKNGDKDEFLLPEFNDLLKVEDYGATVVRNSFKKDMEAPWLKVYVDPEKDDYEQEVTQLRNMIRVLQDREQSLEVQLLEYCGLREQETAVMELQNRLKASTVEVKMFNLKIKTLQSENWRLKEQVSDHAKVLVELENAKTQVKLLDKKISYEAEQNREQIISLQQKVSTLQDQQCKDAAFDQDIQIKLQKLKDLETEAEELRKSNLRLQIENSHLIRRLDSTQILANAVLEDPEVDAVKQERECLKKENVRLMKEIEQLHSDRCSDLEELVYMRWINACLRYELRNYEAPPGKTVAKDLSRSLSPTSERKAKQLILEYANADGAGNIVDFDIDQWSSSQASSLTDFGECDDFSSADYSSAAKTNTTSQTKLLSKLRQLIQGKDSSHHHSHVSSQEKYRHQDSNPPQQSTSTGIEGLRSEFATPIVTSRTSLDFSRLTSTQEEANRRNSDSAFMGSSNKFGARKRGSFSDSLGLDKNNLEKYAEALKDYRVSARHQRRSRSASCS* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00203 603 Coils Coil 252 272 - -
Lapu5g00203 603 MobiDBLite consensus disorder prediction 478 518 - -
Lapu5g00203 603 Coils Coil 283 310 - -
Lapu5g00203 603 Coils Coil 182 202 - -
Lapu5g00203 603 Coils Coil 148 175 - -
Lapu5g00203 603 MobiDBLite consensus disorder prediction 531 554 - -
Lapu5g00203 603 MobiDBLite consensus disorder prediction 531 572 - -
Lapu5g00203 603 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 10 502 IPR040265 -
Lapu5g00203 603 MobiDBLite consensus disorder prediction 479 496 - -
Lapu5g00203 603 Coils Coil 334 361 - -
Lapu5g00203 603 MobiDBLite consensus disorder prediction 497 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00203 Lapu-Chr5 1665011 1668816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00203 - - gmx:100819899 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00203 5 1665011 1668816 Lapu5g00203 5 1665011 1668816 ECH
Lapu5g00203 5 1665011 1668816 Lapu10g00514 10 7472615 7476483 PCT