Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00187 ATGGCACCCAATGGAGAGTGTTTGCCTAGTTCATTCCCTAGGAACAGCAGCAACAACAACAATATGTGCAAACCTCCAAGGCTTTCATCTGATCACATTCAGAGAACAATCTCAGACATCTCGTTTGAGCTAGCCAAGGAAGGGATTGATTTGTCACTTCCACCTATAACTGAGGTTATGGATGCCAAGTGTGAGTGCTGTGGAATGTGCGAGGAGTGTACTCCTGAGTACATAGAGCGTGTGCGTGAGAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTGCTGAGGCAGTGAAGGAAGAGTTAGAGAAAAATGGTGGGAAGAAGGAAGAGGCATTGAGTTCACACATGAGTGCATGTGTGAGGTTCAACAAATATGGGAGGGCTTTCCCAGTTCTGTTCCAAGCTGAGGCCATGAAGGAGATGCTGAAAAAGAACAAAATGGAAGGGAGAAGGGCCAAGTCCTTCAACCCAAGGGACAAAGGAGGACAAAACAAAGGAGGGATTGCTAGGAGTTCAAGTTGCATTCCAGCTATCACAAGAGAGATGAATGGTCTCACAATGGCCAATTAG 573 0.466 MAPNGECLPSSFPRNSSNNNNMCKPPRLSSDHIQRTISDISFELAKEGIDLSLPPITEVMDAKCECCGMCEECTPEYIERVREKFLGKWVCGLCAEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRAKSFNPRDKGGQNKGGIARSSSCIPAITREMNGLTMAN* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00187 190 PANTHER OS01G0745000 PROTEIN 57 183 IPR012876 -
Lapu5g00187 190 MobiDBLite consensus disorder prediction 9 25 - -
Lapu5g00187 190 MobiDBLite consensus disorder prediction 1 25 - -
Lapu5g00187 190 Pfam Protein of unknown function (DUF1677) 59 145 IPR012876 -
Lapu5g00187 190 MobiDBLite consensus disorder prediction 150 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00187 Lapu-Chr5 1495424 1495996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00187 - - gmx:100785884 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00187 5 1495424 1495996 Lapu5g00187 5 1495424 1495996 ECH
Lapu5g00187 5 1495424 1495996 Lapu10g00537 10 7689304 7690536 PCT