Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00145 ATGCGAATCTCAAAAGCTTCCTTCTACGCTCTCCTACTTCACAAACCTTACCACCATCAAAACCTCGTCGTTTTATCGCGGCGTCGTGTTATCTCGTGCGCGCTGAGTATGGCGCTGCTCGTGACCACGCTCTACGTTTTGTGGCCGTCGGATCCAGATCTGAAGATCGTGGGGCTGAAGCTGAGGCGGATAAAGGTGCACCCTGTGCCGCCCATCACCGTGGACATCTCCATGCTGCTGACGCTGCGGGTGCGCAACGCTGACGTGTACTCCATGGACTTGGGTGCAATAAACGTGGCAGTGGCGTACAGAGGGAAGATGCTGGGGCACGTGAGGTCGAGGGAGGTGCACGTGAGGGCGAGGGGGTCTTCCCACGTGGATGCTGACGTGGAATTCTCCGGCATAAGTGTTCTGCCTGAGCTGGTGCTGCTTCTGGAGGACGTGGCCAAAGGTATCGTACCCTTTGACACAGTTAGCCACACTAGGGGCCAATTGGGCCTTTTCTTCTTTCACTTCCCCATGAAGAATATCCCACAGGCTAAACTATCGTGTCAGGTTCTGGTCAGTATAGTAAACCAGACTATTATTCGTCAACATTGTCTCCACGAGGTAATTATCATTAGCTTTGAGTTGCCTTATTCATGA 645 0.5302 MRISKASFYALLLHKPYHHQNLVVLSRRRVISCALSMALLVTTLYVLWPSDPDLKIVGLKLRRIKVHPVPPITVDISMLLTLRVRNADVYSMDLGAINVAVAYRGKMLGHVRSREVHVRARGSSHVDADVEFSGISVLPELVLLLEDVAKGIVPFDTVSHTRGQLGLFFFHFPMKNIPQAKLSCQVLVSIVNQTIIRQHCLHEVIIISFELPYS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00145 214 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 35 200 - -
Lapu5g00145 214 Gene3D - 50 182 - -
Lapu5g00145 214 Pfam Late embryogenesis abundant protein 81 175 IPR004864 -
Lapu5g00145 214 SUPERFAMILY LEA14-like 38 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00145 Lapu-Chr5 1223220 1224871 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00145 - - gmx:100792375 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00145 5 1223220 1224871 Lapu5g00145 5 1223220 1224871 ECH
Lapu5g00145 5 1223220 1224871 Lapu10g00576 10 7977668 7979091 PCT