Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01489 ATGGGCACGGATGAAAGCGACAACTTGGCACAAGGTTCATCTCCTATGCCAGAAAGTGAGAGCGTGGTTCGAGGTTCAGAGCAGGCGAAGGAGCTTAGGGAAGTTGTTCGGGGCTTGAGAAGTGAGGAAGGGTGTGGTGGGGTTGCTGTGAATGGGGATGAGTTTTCTACCATTGAAAAGCAAGGTTTAGGTGACGATGGGGTTGTTAACGTTGTCAATAATATGAATGTCTTGGAGGCCAAGGTTTCACTTGTGAGTGGAAATAATTGTCATGTTTTGGCTGATTCTGAGGTAAATGGGATGTCCTCTTGGTTAGGAATGCAAGAAAGTGATATGAGCACGGTGTTTTCTAGTGATGGAACTGAGAAGCTGGATTATGATTATGCATCTGAGAAGATGGACTACATGTTTCCTTCTGAGATAGAAGAGACTGCTGTTTTGAGTTTGGATGGATCGGTAGGGGATGGTGGAGAGCATGGAAGTGATGGAGGCAGGAGTGGTGAGGAAGGGAAATATGAAGATTGTGATGCCGACAATGTCACTATTGCTTCGGAGAGTAGAGTAGCAGAAGTTGCGGTTTTGAGTGGGGATAGTTTGGTGGGGGTTGGTGCTGAACACACAATAGATGTGAAGGAAAGTGAAGACTGTGATGGGAACATTGGGGGTATTGATTCTGAGAGTAGAGGAGCGGAAGCTGCTGTCATGAGTGTGTATAGCTTGTTAGGAGTTGATGGTTATGACAGAAGAGAAGAGGATATGAGCGAAGTGGAAGATAAAGATGAAGACCGAGATGGGAACATTGTGGTTGGGGTTGATGGGCAAGGCAGAAGAGAAGAGAATATAAGTGAAGAGGGAGATAAAGATGAAGAATGTGATGGGAATGATGTGACCGTTACTTCGGAGAGTAGGCCAGCAGAAGCTGCTGTTTTGATTGTGGATAAGTCGGTAGGAGTTGGCAAGGAAGATGGAAGAGAAGAAGATATCAGTGGAGAGGAAGGTGGAGATGGAGACGGTGATGGGAATGCTGTGACAATTACTTCTACGGTTAGGGTAGCAGAAGCTGCTGTTTTAGGCGTGGATACTTTTGTAGGAGTAGGTAGGGAAGACAGAAGAGAAGATGATATCAGTGAAGAAGAAGGTGGAGATGAAGACCGTGATGGGAATGTTGTGACTATTACTCCTGAGAGTAGAGTAGCAGAAGCTGCTGTTTTGAGTGTGGATAGTTTGGTAGGAATTGGAGGGCAAGACAGAAGAGAAGAGGATATACGTGAAGAAGAAGGTAAAGATGAAGACTGTGATGGAGACATTGTGGCTGTTGCTTCTGAGAGTAAAGTTGCAGAAGCTGCTGCTTTGAGTGTGGATAATTTGATAAATGTTGGCGGGGAAAACAAGTCAGGTGAAGACTGTGATGGGAACATTGTGACTCTTGCTTCTCAGAGTAAAGTTGCAGAAGCTGCTGATTTGAGTGTGGATAGTTTGGTAGGTCCTGGTGCGTATGACAAAATAGTGGAGGAGGAATGTGAAGACAGAGGAAAGAACAAAGAATGTGGTGGAAACATTGTGACTATTACTTCTGAGAACAGTGTTGAAGATGCGGCTGTTTTGAGTGTGGATGGTTCAGAAGCTATTGGTGTTGAAGAAACAAAAGACGGAGGAGGAAGTGAAGAGGTAAAAGAAGACCAAGATTGTTCTGGGAACATTGTGACTATAGAGGTTCCAATTGCTGAGACAAGTGAGAACATGGATGTAGAAGTGGAGGACTTGAGTGATGAAGGGTATGGTTTTGCTGTTGGTGATTTTATTTGGGGTCAAGTTGAGAGTCATCCTTGGTGGCCTGGCCGGATTTATGACCCATCTGATGCATCTGATGTTGCATTGAAGCTGAAACAAAAGAATAGACTTCTGGTTGCCTACTTTGGGAATGGAACCTTTGCGTGGTGTCATCCATCACAGTTAAAGTCTTTTGAGGACAACTTCGATGATATGGTTAAACAGAGTAGCCACATCAATTTTGTTAATGCTGTGCAAGAAGCTGCAAGTGAGGTTGGGAGGCTTCTGTCAACGAAGTTGAGTTGTTTAGTTGTTGACAAGAAAACTGATTCTGAGTCTGCTCTCCCATTGGGGAAAAATTCTGGAATCAAGGAAGGAGTTATTGTGCCAGACACTGGCATAGAGAGACTTCTATATAGTCAATTTGAGCCTGCTGAATTACTTTCTCATGTGAATCAAATTGCTCGAATTATTGATAGTGGTAGTAATATTATGGAGCTGGAGATCTTAAAGGCTCGACTTTCTGCATATTATCTGTCAAAAGGGCATAAATTACCTGATTTTATGGATACCCAGCTGGTTCCTGGAGTTGAAGATAGTCTAATGGATGAAACAGTCGTTGTAGAGAACTGTAAAAGTAACGTGGAAGCACCAACCCAAGGGCCATTTGATGAACTGGGTCATTCTCCAGGGCTTTCAGGGAACATACCGAACCATGTTAGAAAACAGAAAAGCATTGCTGAAATTATGAGGGAGGACAAAGATGTTCATACGGCAAGTAGGGAGGTGGAAACAACTGTTGAAATGGTGAAAGCAATTGGCTCAAATGCTGGAAAGAAGAGAAAAGGTGGTGAGGATGGTATGGCATCTAAACCTGTTCAAAAGAAAAAAGAGTTGCTTGCAGACACTGATGAAGATGTGTCAAGTGCTGAACATTGTGCCAAGGAAAAAAGTAGTAGCATTGGCTCATGGCTGTTGTCGAAGGAGAAGAAAGAAGTTTTAGATGAAGGGAAGAGCGAAGAACGAAACAAGAAGGGTAGTTTGTCAAGAGAAAGGAAGAAAAGTAAGTACTTGTCCCCTCCTTTCACTACTCCAATCAGGGGGCAAAGGGAGGAAAATATTGAAGCTGAATTCCTTACAGTATCGAGAAAAGTTAAAGCATCACAGACAAGTGCAGTGGCTGCTGTCCTGCAATATCCTCCAGTTTACATGGGGAGGCTTTTTGATAGCTCAAATTACCAAACCCACAAAGATGATGGGGAAAAGGTTATTGATCCAAAGAAAATCCAGGCTTCTGTGGAGGAAGTTCTGTCCCAAGTCCGTAATGCAGCTATCAGTCCGCAAATTCGTAGGGAAGGCACTTCTCTTGACCAATTTGTTGACTTCACTTTTGCCTTTAGAAGTTCATTATATTCCGAAGGATCGTTACGCGATGTATACGAGAAGAATCAGCCTGGAAGGAAAAGAAAGAGGCCAGAATCTGAAGAAGATGGAATGTTGAAAGATGCTCATATGTCATCACTGAAACAAAATTCTGGGCCAAAGAAGAAAAGAACGGAAACTGCCTCAGGTAAGAAGGGGGCTGATGAAAATGCTTCAGGTGCGGTTCTTGTTGTTTCATTTTGGCCAGGATCATCTACGCCTTCAAGATCTGACCTTATCTCAGTGTATAGTGAGTTTGGGGCTCTGAATGAAGCAGAAACTGATATGTTCTACAATAACACAGCTAGAGTGTCCTTCCTAAGAACTTCTGATGCTGAAAATGCATTCAACCATTCTCAAAATAATAATCCTTTTGGATCTTCTGATGTCACTTTTCAGCTCCAGTATTACTCTGATGGATCGAAGTCTGGACAGCATGGTGAAAGATCAAAGAACAAACCTTTGCTAGCAGCTACACCACCATCAGTTTCACCCTCACAGGGTGGTGAAGCATCCAGATTGATCTTTATCCAGAAGAAGCTTCAAGGTCTGACTTTGATACTTGAAGCATCAGGTGACAAATCTCCCGATGTGATGGCTAAACTACAGGGTGAGGTGAAGGCTCTTCTGGAGGATGTCAACCAAATGGTTGAAGCTTCTTTGTTTTAG 3861 0.4336 MGTDESDNLAQGSSPMPESESVVRGSEQAKELREVVRGLRSEEGCGGVAVNGDEFSTIEKQGLGDDGVVNVVNNMNVLEAKVSLVSGNNCHVLADSEVNGMSSWLGMQESDMSTVFSSDGTEKLDYDYASEKMDYMFPSEIEETAVLSLDGSVGDGGEHGSDGGRSGEEGKYEDCDADNVTIASESRVAEVAVLSGDSLVGVGAEHTIDVKESEDCDGNIGGIDSESRGAEAAVMSVYSLLGVDGYDRREEDMSEVEDKDEDRDGNIVVGVDGQGRREENISEEGDKDEECDGNDVTVTSESRPAEAAVLIVDKSVGVGKEDGREEDISGEEGGDGDGDGNAVTITSTVRVAEAAVLGVDTFVGVGREDRREDDISEEEGGDEDRDGNVVTITPESRVAEAAVLSVDSLVGIGGQDRREEDIREEEGKDEDCDGDIVAVASESKVAEAAALSVDNLINVGGENKSGEDCDGNIVTLASQSKVAEAADLSVDSLVGPGAYDKIVEEECEDRGKNKECGGNIVTITSENSVEDAAVLSVDGSEAIGVEETKDGGGSEEVKEDQDCSGNIVTIEVPIAETSENMDVEVEDLSDEGYGFAVGDFIWGQVESHPWWPGRIYDPSDASDVALKLKQKNRLLVAYFGNGTFAWCHPSQLKSFEDNFDDMVKQSSHINFVNAVQEAASEVGRLLSTKLSCLVVDKKTDSESALPLGKNSGIKEGVIVPDTGIERLLYSQFEPAELLSHVNQIARIIDSGSNIMELEILKARLSAYYLSKGHKLPDFMDTQLVPGVEDSLMDETVVVENCKSNVEAPTQGPFDELGHSPGLSGNIPNHVRKQKSIAEIMREDKDVHTASREVETTVEMVKAIGSNAGKKRKGGEDGMASKPVQKKKELLADTDEDVSSAEHCAKEKSSSIGSWLLSKEKKEVLDEGKSEERNKKGSLSRERKKSKYLSPPFTTPIRGQREENIEAEFLTVSRKVKASQTSAVAAVLQYPPVYMGRLFDSSNYQTHKDDGEKVIDPKKIQASVEEVLSQVRNAAISPQIRREGTSLDQFVDFTFAFRSSLYSEGSLRDVYEKNQPGRKRKRPESEEDGMLKDAHMSSLKQNSGPKKKRTETASGKKGADENASGAVLVVSFWPGSSTPSRSDLISVYSEFGALNEAETDMFYNNTARVSFLRTSDAENAFNHSQNNNPFGSSDVTFQLQYYSDGSKSGQHGERSKNKPLLAATPPSVSPSQGGEASRLIFIQKKLQGLTLILEASGDKSPDVMAKLQGEVKALLEDVNQMVEASLF* 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 868 903 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 1070 1093 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 316 340 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 1 29 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 368 389 - -
Lapu4g01489 1286 CDD PWWP 598 681 - -
Lapu4g01489 1286 ProSiteProfiles PWWP domain profile. 597 658 IPR000313 -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 922 956 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 864 904 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 1 21 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 922 947 - -
Lapu4g01489 1286 Gene3D - 586 690 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 1067 1119 - -
Lapu4g01489 1286 PANTHER ALDOLASE-RELATED 292 1222 - -
Lapu4g01489 1286 Pfam PWWP domain 598 680 IPR000313 -
Lapu4g01489 1286 SUPERFAMILY Tudor/PWWP/MBT 591 704 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 1202 1233 - -
Lapu4g01489 1286 Coils Coil 1263 1283 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 274 302 - -
Lapu4g01489 1286 MobiDBLite consensus disorder prediction 150 173 - -
Lapu4g01489 1286 SMART PWWP_4 595 656 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01489 Lapu-Chr4 32053412 32057272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01489 - - pvu:PHAVU_004G012100g 1908.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01489 4 32053412 32057272 Lapu4g01489 4 32053412 32057272 ECH