Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01114 ATGCTGCACCATTTCAACATGAACATCTTGTTCACGTTCCTTTTAGCTGTCACCACAGCATTTTTCTACGTCCCTGACTTCAAACATCGAGCTTCGTTTATAATAGCAGCATGCATAGCCATGACAATGTTATACCACTTCCTAATGAACCGACCCTGCAAAATTTACTTGGTGGACTTTGCATGCTTCAAGCCAAGCACGGCGTGCCTTTGCTCGAAGGAAACGTTGCTGGACAGAGCCAAGCGCGTTGGCTTTCTCTCCGACGAGAACTACAAGCTCGTGAACAAGATTCTCGACAGGTCTGGGTTGGGACCCCGGACCTATGTCCCAGAGGGGCTGCTGGAGATTCCGCCGAAGCTAACGTTGGACGAGGCAAGGAAGGAAACAGACACAGTGCTCTTCGGAGCTGTTGATGAGCTTTTGGAGAAAACTGGGATTGAGGCAAAGGACATAGGGATTCTTGTAGTGAATTGTTGCTTGTTCAATCCCACACCGTCGCTGTCTGACTCCATTATTAATCGGTACAAGCTTCGAGGGAACGTTTTGGCGTATAATCTCAGTGGCATGGGGTGCAGTGCAGGGGTTCTTGCTGTTGACTTTGCCAAACAGCTCCTTCAGGCACATCCGAATTCGTACGCGCTGGTTCTGAGCACGGAAAATGAGATCTCGAGCATGTACTGGGGCAACAACCCATCAATGCTTCTGGTGAACTGTCTCTTCCGCATGGGCGGCTCCGCCGCGCTCCTCTCAAGCCACCCGTCGGACCGCCGGCGCGCAAAGTACCAGCTGCTCCACACGCTCCGGACGCACGTAGGCGCTGACGACAACAGCTACAGCTGCGTGTTCCAGGCGGAGGATGAGGAGAACAAGGTGGGAGTGTCGCTCTCGAAAGAGCTGATGAACGTGGCACGCGACGCCCTGAAAGTCCACATCACCTCCCTGGGGCCCCTCGTCCTCCCACTCTCGGAAAAGGTAAAGTTCTTGGCGAACCTGATGGAGAGGAAGGTGCTGAAGACGAAGATCGAGTCCTACATGCCCAACTTCAAGCTTGCGTTCGAGCACTTCTGCATCCACACGGGAGGGAGGGCTGTGCTGGACCGCATGCAAAAGAGTCTGGAGCTTGAAGACTGGCACATGGAACCTTCTAGAATGACGCTGTACAGGTTCGGAAACACTTCTTCGAGCTCCGTGTGGTACGAGTTGGCGTATTGTGAGGCGAAGGGGAGGGTGAAGAAGGGTGATAGGGTGTGGCAGATGGCGTTTGGGTCGGGGTTCAAGTGCAACACTGCGGTCTGGCGTGCCTTGACCACCATCGAAGCTGGGTCCTGCAGGAGCGCGTGGAGGGGTGAGATTGCTAACTTTCCTGTGAAGATTGATCCTCTCCCCGTGAAGACTAACAAGTAA 1404 0.537 MLHHFNMNILFTFLLAVTTAFFYVPDFKHRASFIIAACIAMTMLYHFLMNRPCKIYLVDFACFKPSTACLCSKETLLDRAKRVGFLSDENYKLVNKILDRSGLGPRTYVPEGLLEIPPKLTLDEARKETDTVLFGAVDELLEKTGIEAKDIGILVVNCCLFNPTPSLSDSIINRYKLRGNVLAYNLSGMGCSAGVLAVDFAKQLLQAHPNSYALVLSTENEISSMYWGNNPSMLLVNCLFRMGGSAALLSSHPSDRRRAKYQLLHTLRTHVGADDNSYSCVFQAEDEENKVGVSLSKELMNVARDALKVHITSLGPLVLPLSEKVKFLANLMERKVLKTKIESYMPNFKLAFEHFCIHTGGRAVLDRMQKSLELEDWHMEPSRMTLYRFGNTSSSSVWYELAYCEAKGRVKKGDRVWQMAFGSGFKCNTAVWRALTTIEAGSCRSAWRGEIANFPVKIDPLPVKTNK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01114 467 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 353 433 IPR013747 -
Lapu4g01114 467 Pfam FAE1/Type III polyketide synthase-like protein 48 336 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lapu4g01114 467 SUPERFAMILY Thiolase-like 43 259 IPR016039 GO:0016746
Lapu4g01114 467 SUPERFAMILY Thiolase-like 264 433 IPR016039 GO:0016746
Lapu4g01114 467 PANTHER 3-KETOACYL-COA SYNTHASE 33 457 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu4g01114 467 PIRSF Very_long_ch_3-ktacl-CoA_syn 4 466 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lapu4g01114 467 CDD CHS_like 50 432 - -
Lapu4g01114 467 Gene3D - 92 434 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01114 Lapu-Chr4 27631783 27636194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01114 9 462 Miscellaneous Gene Families AT1G04220 59.110 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01114 K15397 - gmx:100803579 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g01114 4 27631783 27636194 Lapu4g01114 4 27631783 27636194 ECH