Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00856 ATGGGACACGACGAGTTGGTGACAGTTGACAACGTATCCCGAGATGAGCTTGAATCAACTTCTTCTGAGAAGAAAGAGGATAGGAGGAAAAATTTGGAGCAGAATTCATCAGAGGTTAATTCTACTCCTGGAGTAGGTTTGGACCATCTCATCCCAGAGCCTGTTGGAGCTGAGAGTAACCTGCTTGTTGCTGCTGATAATGAGATCATGTTTTCTAAATCAAAGATGGACAAATGGGATTCTCCAAGGCAAGACCTTATAGTGGACAGGTTATCAGAGTGTGAGAAGCAAAAGCTGCTTAACCTTGTGAATATACAAAATGATGGGACTGTTGAAGTTGATCTGGAAAAAGATGCACCTCTTGTATCAGAAGTGTTGAAGTTTCAATCTTTTGAAGAGTCAACAATGAGTGCAAGTGTTGTTTCTGAATCAAAAAAATCAGCTCCCTGGTTACAAATTGTCATGCTTGTGGTTGGGACTAGAGGCGATGTACAACCTTTCCTGGCTATCGCAAAAAAACTCCAGGACTATGGTCATCGTGTTAGGCTAGCAACACATGCTGATTTTGACACATTTGTAAAGAGTACTGGTGTTGATTTCTATCCGTTGGCTGGTGATCCTCGTGCTTTGGCAAGATATATGGTGAGGAATAAAGGTATAATCCCATCGGGTCCAACTGAAATATCTATCCAAAGAAAGCAGCTGAAGGTTATTATTGATTCTCTTCTTCCAGCATGCATAGGACCTGATTTGGAAACAGGTGTTCCTTTTAGAGCTCAGGCTATTATAGCCAATCCTACTTCATGTGGACATACACACATTGCTGAGGCCCTTGGGGTGCCCCTTCACATCTTTTTCACAATGCCTTGGACGCCAACATATGAGTTTTCACACCCTTTGGCAAGTGTTCCTCAAAGTGCTGGCTATTGGCTGTCGTATATAATTGTGGATCTACTGATATGGTGGGGAATACGAGGACTCATCAACGATTTCAGGAAAAGAAAATTGAAGCTTGCTCCTATTGCATACTTCAGTATGTACAGTGGATCAATAACACATTTACCTACTGCCTATATGTGGAGTCCTCATGTTGTTCCAAAACCAAGTGACTGGGGCCCCTTAGTTGATGTCGTTGGTTATTGTTTCTTGAACCTTGGATCAAAGTATCAACCACGGGAAGATTTGGTCCGATGGATTAAAAAAGGACCAAAACCTTTATATTTTGGGTTTGGGAGCATGCCTCTCGATGATCCTAAAAGAACTACTGATGTTATAGTGGAGGCACTGAAGGATACAGGACAACGGGGAATTATTGATCGGGGCTGGGGGAATCTAGGGAACTTGGTAGAAGTTCCCAACAATGTTTTCGTGATAGAGGAATGCCCTCATGACTGGTTGTTTCCCCAATGTTCTGCTTTGGTGCATCATGGTGGTGCTGGAACAACGGCTACAGGACTGAAGGCTGGGTGTCCAACAACCATTGTTCCATTCTTTGGAGATCAGTTCTTTTGGGGAGACAGAATATATCAGAAAGGGCTGGGACCTGCTCCAATTCCTATATCTCAGCTTAGTCTTGAAAATTTAACAAATGCCATAGAATTCATGCTCCAGCCAGAGGTAAAATCACAAGCAATGGAAACCGCAAAGTTGATTGAGAATGAAGACGGTGCTACAGCTGCAGTTGATGCGTTTCATCGCCATCTACCACCAGAGCTACCACTACCAACTCCATCTCCAGTGGTGGAGGACCATGCAAATCCTTTGCAATGGTTTTTTCTCCAACTAGCAAAATTGTGCACTTTACCTTGTGGGAGTGTATAG 1821 0.4316 MGHDELVTVDNVSRDELESTSSEKKEDRRKNLEQNSSEVNSTPGVGLDHLIPEPVGAESNLLVAADNEIMFSKSKMDKWDSPRQDLIVDRLSECEKQKLLNLVNIQNDGTVEVDLEKDAPLVSEVLKFQSFEESTMSASVVSESKKSAPWLQIVMLVVGTRGDVQPFLAIAKKLQDYGHRVRLATHADFDTFVKSTGVDFYPLAGDPRALARYMVRNKGIIPSGPTEISIQRKQLKVIIDSLLPACIGPDLETGVPFRAQAIIANPTSCGHTHIAEALGVPLHIFFTMPWTPTYEFSHPLASVPQSAGYWLSYIIVDLLIWWGIRGLINDFRKRKLKLAPIAYFSMYSGSITHLPTAYMWSPHVVPKPSDWGPLVDVVGYCFLNLGSKYQPREDLVRWIKKGPKPLYFGFGSMPLDDPKRTTDVIVEALKDTGQRGIIDRGWGNLGNLVEVPNNVFVIEECPHDWLFPQCSALVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYQKGLGPAPIPISQLSLENLTNAIEFMLQPEVKSQAMETAKLIENEDGATAAVDAFHRHLPPELPLPTPSPVVEDHANPLQWFFLQLAKLCTLPCGSV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00856 606 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 407 550 IPR002213 GO:0008194
Lapu4g00856 606 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 153 568 - -
Lapu4g00856 606 Gene3D Glycogen Phosphorylase B; 153 556 - -
Lapu4g00856 606 MobiDBLite consensus disorder prediction 1 48 - -
Lapu4g00856 606 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 39 597 - -
Lapu4g00856 606 MobiDBLite consensus disorder prediction 1 34 - -
Lapu4g00856 606 CDD GT1_Gtf-like 153 567 IPR002213 GO:0008194
Lapu4g00856 606 Pfam Glycosyltransferase family 28 N-terminal domain 153 295 IPR004276 GO:0005975|GO:0016758|GO:0030259
Lapu4g00856 606 Gene3D Glycogen Phosphorylase B; 382 551 - -
Lapu4g00856 606 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 382 551 - -
Lapu4g00856 606 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00856 Lapu-Chr4 22020928 22040026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00856 174 606 Glycosyltransferase AT1G43620 77.117 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00856 K05841 - gmx:100797391 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00856 4 22020928 22040026 Lapu4g00856 4 22020928 22040026 ECH
Lapu4g00856 4 22020928 22040026 Lapu7g01944 7 35572151 35581526 PCT