Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00850 ATGCGTACAACGGCGGAATTTCAAGGTTCTGTTCTGAATCTTCGCGGGGTCCAGGTTCACTCCATGGAGGGTTCAAGCATGGAGCAAGAGCTTGATTTGTTTCAGAAGCATGTGACTGAGCGATTCCTGGAGCTATCTTCAGTTGAAAGCGGGGAATTGCTCTCTCTTTCATGGGTTAGGAAGCTGCTGGATTCGTTTCTGTGTTGCCAAGAGGAGTTCAGGGTGATTCTCCAGAACCACAGGGCTCAGGTGTCGAAGCACCCTCCCCTGGATCGCATGGTGGGTGAGTTTTTTGAAAGGAGTGTGAAGGCACTTGATGTGTGCAACGCAATCCGTGATGGGGTTGAGCAGATTAGGCAGTGGCAGAAGCTGTTAGAGATTGTTCTCTGTGCATTGGATCAGAAAAGGAGCATTGGTGAGGGCCAATTTCGCCGCGCCAAGAAGGCGCTTGTTGACTTGGCCATTGGAATGCTTGATGATAAGGACTCCAACTCCAGTGGTTCTATAGCTCATAGGAACAGGTCCTTTGGTAGAAACAACAACGGTTCCAGGGATCATAACCATAGCAATAGTCAGCAGCATAATTCCTTTGGGCATTTTAGGTCACTTTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTCCAAGCCATTGGGAACAACTTGTCCCCTCCTAAGGCTAATGATCTTGTTGCTACTAATGGCCTTGCATTGCCTATTTACACAATGAGTTGTATTCTGGTGTTTGTTATGTGGGCACTTGTGGCTGCAATTCCATGCCAGGACCGTGGGCTGGGGCTCCATTTCTCTGTGCCGAGGCAGTTCCTGTGGGCGGCTCCGGTGGTGGCGCTGCACGAGCGGATCGTGGAGGAGTCAAAGAAGAGGGAGAGGAAGAACACCTGTGGGTTGCTGAAGGAGATTCACCAGATTGAGAAGTGTTCTAGGGTGATCAACGAGTTGGCTGATTCTGTGCAGTTTCCTTTGAGTGAGAAGAAGGGAGAAGAGGTTAGGCAGAGAGTGCAAGATGTTTCAAGGGTTTGTGAAGCATTGAAAGATGGATTGGACCCTATGGAACGCCAAGTGAGGGAGGTGTTTCACAGAATTGTACGCAGCAGAACTGAAGGGCTTGATACCCATGGCAGAGGGTAA 1155 0.4978 MRTTAEFQGSVLNLRGVQVHSMEGSSMEQELDLFQKHVTERFLELSSVESGELLSLSWVRKLLDSFLCCQEEFRVILQNHRAQVSKHPPLDRMVGEFFERSVKALDVCNAIRDGVEQIRQWQKLLEIVLCALDQKRSIGEGQFRRAKKALVDLAIGMLDDKDSNSSGSIAHRNRSFGRNNNGSRDHNHSNSQQHNSFGHFRSLSWSVSRNWSAARQLQAIGNNLSPPKANDLVATNGLALPIYTMSCILVFVMWALVAAIPCQDRGLGLHFSVPRQFLWAAPVVALHERIVEESKKRERKNTCGLLKEIHQIEKCSRVINELADSVQFPLSEKKGEEVRQRVQDVSRVCEALKDGLDPMERQVREVFHRIVRSRTEGLDTHGRG* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00850 384 PANTHER BPS1-LIKE PROTEIN 13 380 - -
Lapu4g00850 384 Pfam Protein ROH1-like 7 380 IPR008511 -
Lapu4g00850 384 ProSiteProfiles R3H domain profile. 332 384 IPR001374 GO:0003676
Lapu4g00850 384 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00850 Lapu-Chr4 21743194 21745261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00850 - - gmx:100806977 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00850 4 21743194 21745261 Lapu4g00850 4 21743194 21745261 ECH
Lapu4g00850 4 21743194 21745261 Lapu7g01952 7 35622435 35624664 PCT