Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00694 ATGAGTTCATATTTTGAGGAAAGGGCACCTTGTTGTGGTTCTCACTTCTGGATTTTACTAAGCACTTGTTCGGCTTTTGTGTTATTTGCTGCTATCACATCTGGTCTTGCTCTAGGACTCTTGTCTTTCAGCCAAGTTGATCTTGAGGTTCTTGTTAAAGCTGGGAAACCTCAAATTCAGAAAAATGCAGCGAAGATTATGTCAATTGTTAAGAATGAGCATTTACTTTTATGCACCCTCCTCATAGCTAAATCAATGGCACTGGAGGGGGTTTCTGTTTTTATGGAGAAAATGTTCCCAGAGTGGCTTTCTATATTAATAGCAGCCACCATTTTGGCTATCACTGCAGAGATTATCCCTCAAGCCTTGTGTTCTCGATATGGTTTAAGTGTTGGGGCAACGTTGTCTCCCTTTGTTCGAGTTCTTATGCTGATTTTCTTCCCAATAGCATATCCACTTAGTAAGTTGTTGGATTGGCTTCTTGGCAAGGGGCATACTGCACTTTTAGGACGAGCAGAGTTGAAGACTTTAGTCCATTTACATGCCAATGAGGCAGGTAAAGGTGGAGAATTGACACTTCATGAAACTAAAATAATTGCTGGAGCTTTGGACTTAACACAGAAGACTGCTAAAGATGCTATGACACCTTTAAGTGAAACATTTTCTCTTGACATAAACTCCAAACTTGACATGCATACAATGGGCCTAATAATGAGCAAAGGTCACAGCCGCATACCAGTCTACTCTGGAAAACAAACAAATATTGTTGGTATCATCTTGGTAAGGAATTTAATCTTCTGTCGTCCTGAAGATGAAACACCAATTAAATATATGACTATCAGGAGAGTTCCTAGAGTTGCTGAAGATTGGCCATTGTATGATATTCTGAATCAATTCAGGAATGGTCAAAGCCACATGGCTGTTGTCCTCAAGTGTGAAGAGAACATCAGAACTGCTGCAACTGAGAGAGAAGGAAAAACTCCAGGACTTGGCTCTTCATGTGAACCGGGAGATTATAGTCGCATCTCAACCGATGCATCAGATTGGCATTCACAAGAAACAGAATATTATAGTGCAACACTGAAGAGTGCCATGAATCGAGAGGGTGACTCAGATCTTCCACAAAGAAGATCAGAACAACCTGATGCAAGTTCATCCTTTGAGAATGTGGAGTCTCTTCCAACAGCAGAGGAGGAAGTGATTGGGATAATCACATTGGAAGATGTTATGGAAGAGTTACTTCAGGAAGATATATTGGATGAAACTGATCAATATGTTGATGTTCATCAAAATATCAAAATAAAACTGCAACATGCAAGAAGAGTGTCATCATCAGGGTCATCCAGAAGGGCTTCAAGTTCTCGTCAACAACGGAGAAGTTCAGATGCTTCTCGACTTTACTTTTTAACTCCTACATATGTTTTACCTGTTTCTCCATAA 1440 0.4014 MSSYFEERAPCCGSHFWILLSTCSAFVLFAAITSGLALGLLSFSQVDLEVLVKAGKPQIQKNAAKIMSIVKNEHLLLCTLLIAKSMALEGVSVFMEKMFPEWLSILIAATILAITAEIIPQALCSRYGLSVGATLSPFVRVLMLIFFPIAYPLSKLLDWLLGKGHTALLGRAELKTLVHLHANEAGKGGELTLHETKIIAGALDLTQKTAKDAMTPLSETFSLDINSKLDMHTMGLIMSKGHSRIPVYSGKQTNIVGIILVRNLIFCRPEDETPIKYMTIRRVPRVAEDWPLYDILNQFRNGQSHMAVVLKCEENIRTAATEREGKTPGLGSSCEPGDYSRISTDASDWHSQETEYYSATLKSAMNREGDSDLPQRRSEQPDASSSFENVESLPTAEEEVIGIITLEDVMEELLQEDILDETDQYVDVHQNIKIKLQHARRVSSSGSSRRASSSRQQRRSSDASRLYFLTPTYVLPVSP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00694 479 PANTHER METAL TRANSPORTER CNNM 6 459 IPR045095 GO:0010960
Lapu4g00694 479 FunFam DUF21 domain-containing protein 193 328 - -
Lapu4g00694 479 SUPERFAMILY CBS-domain pair 198 415 IPR046342 -
Lapu4g00694 479 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
Lapu4g00694 479 MobiDBLite consensus disorder prediction 439 464 - -
Lapu4g00694 479 MobiDBLite consensus disorder prediction 367 393 - -
Lapu4g00694 479 Pfam Cyclin M transmembrane N-terminal domain 25 184 IPR002550 -
Lapu4g00694 479 Gene3D - 195 330 IPR046342 -
Lapu4g00694 479 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Lapu4g00694 479 MobiDBLite consensus disorder prediction 378 392 - -
Lapu4g00694 479 Gene3D - 380 421 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00694 Lapu-Chr4 14729040 14734064 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00694 K16302 - gmx:100798424 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00694 4 14729040 14734064 Lapu4g00694 4 14729040 14734064 ECH