Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00657 ATGACGGATGTAGTACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAAACCAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGCATCTTCCACAGCGCCGTGCAGGTTTATGGAGAGGATGAATGGTCATTTGGGTTCTGTGATCAAGGAACCGGAGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTATACATTTCGTGAATCCATTGTTCTTGGGCAAACAAACTTTTCCATTTTCAAGGTGAATCAAATACTAAGAGAACTCAGTAGAGAGTGGCCAGGGAGTTCATATGATCTGCTGGCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGGCTTGGTGTACCAAAACTTCCTGCTTCCATGACAGGTTGGGTTAATAGGTTTGCGAATGCCGGTGATACTGCTATGGAAGTGGCCGGAAATACTGCATTACGGTTTCGGCAAGCTAAAACCGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGTGTTACGAATAATGTTACTAATAACGTTAAGAATGGTCCCGAGTCCCCGAACAATTCAAACAGAGGAGGGTCCCCTAGATTTCAAGCTGCTTGGTTGAAAAATATGATTACTAATGGAGCAAAACCATCTACCAGTTCTGAAGCTGAGGATCAGAATGGAGTTATGCCTCTACCACCAAAGCGAGAAGATGGCAAGGCAATGCTACATAGTTCATCTTCACACGATAGTTGA 771 0.4332 MTDVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGEDEWSFGFCDQGTGVFSCPSGKNPMYTFRESIVLGQTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLGVPKLPASMTGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPESPNNSNRGGSPRFQAAWLKNMITNGAKPSTSSEAEDQNGVMPLPPKREDGKAMLHSSSSHDS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00657 256 Pfam PPPDE putative peptidase domain 3 149 IPR008580 GO:0008233
Lapu4g00657 256 Gene3D PPPDE domains 1 172 IPR042266 -
Lapu4g00657 256 MobiDBLite consensus disorder prediction 186 205 - -
Lapu4g00657 256 MobiDBLite consensus disorder prediction 242 256 - -
Lapu4g00657 256 PANTHER DESUMOYLATING ISOPEPTIDASE 2 208 IPR008580 GO:0008233
Lapu4g00657 256 ProSiteProfiles PPPDE domain profile. 2 152 IPR008580 GO:0008233
Lapu4g00657 256 MobiDBLite consensus disorder prediction 186 256 - -
Lapu4g00657 256 MobiDBLite consensus disorder prediction 217 231 - -
Lapu4g00657 256 SMART DUF862_2a 2 161 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00657 Lapu-Chr4 8226112 8230066 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00657 - - gmx:100814440 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00657 4 8226112 8230066 Lapu4g00657 4 8226112 8230066 ECH