Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00648 ATGGCTTCCCGTTACGAACTCGAACTGAACCTCGCTTCGGCTCGTGGCTTAAAAAACGTGAACTGGCGCCACGGCGCAAACCGCCCATACGCCGTTGTTTGGGTGGACCCCAAGAACAAGTGCTCCACTCGCGTCGACGAGGGCGGCGACACCGATGCCAGGTGGGATCAAACCCTAGTTATTCCTCTTCCTCCTGAGCCCCTCGAGAATCTCACGCTCCACGTCGATGCGGTCCACGCCGGCTCCGAGGAGGACACCGAGCCTCTCATCGGCTCGGCTCGGCTTAAGCTCGTTGAAGTCCTTGATGACGTGGGAATCGGAGCGCGCGTGAGCCGCACTCTCGCGCTGAAACGCCCCTCGGGAAGACCCCAAGGGAAGGTGGACGTTAATGTCGTTATAAGGGAGTCTGGTGGCTATCGTACGCAGGGTGCATACTACGCGCCTCCTTTGGGTGTAAGGGACTATTCCCCTGCTCCGCAGGGCTATGGGTACCCGTCTCAACAGGATAATTATAATCATTATTATTCTGCGCCTCAAACGACATCGTATGGACAGGGGTATTCGGGGTCTCAGACGGCGTCGTATGGACAAGGGAGTGGTTATGGTTACGGAAGTGAGTACGCGCCGAAACAAGAGAAGAAGAGTAAGTTTGGGGGGATGGGGACAGGATTGGCTGTGGGCGCGGTCGCTGGGGTTCTAGGTGGAGTCGCGCTCGTCGAGGGTGCTGATTTTCTGGAGGACAAGATTGCTGATGACGTCGCAGATAAGGTTGAGGATGATCTTGGATATGATGAAGATGATTTCTAG 807 0.5626 MASRYELELNLASARGLKNVNWRHGANRPYAVVWVDPKNKCSTRVDEGGDTDARWDQTLVIPLPPEPLENLTLHVDAVHAGSEEDTEPLIGSARLKLVEVLDDVGIGARVSRTLALKRPSGRPQGKVDVNVVIRESGGYRTQGAYYAPPLGVRDYSPAPQGYGYPSQQDNYNHYYSAPQTTSYGQGYSGSQTASYGQGSGYGYGSEYAPKQEKKSKFGGMGTGLAVGAVAGVLGGVALVEGADFLEDKIADDVADKVEDDLGYDEDDF* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00648 268 PANTHER INGRESSION PROTEIN FIC1 6 228 - -
Lapu4g00648 268 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Lapu4g00648 268 Pfam C2 domain 6 100 IPR000008 -
Lapu4g00648 268 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Lapu4g00648 268 Gene3D C2 domain 1 134 IPR035892 -
Lapu4g00648 268 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00648 Lapu-Chr4 7928407 7929529 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00648 - - gmx:100805876 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00648 4 7928407 7929529 Lapu4g00648 4 7928407 7929529 ECH