Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00604 ATGGCTTCTGTATCCCTTCTTCTCGCCCTGCTCGTGTTCTTCGTAATGGGCACTTCTCTTTCGAACAGCAGTAGGAAGGAATTAAGGAACAAGGAGAAAACTGCATTACAGATGTTAGAGCGCCCAGTTCATTATTCCAACAGTATTAACCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTATATACAAAGGTTTTTTGTCTGACAAGGAGTGTGATTACCTTATTTCTTTGGCATATGCTGAGAAAGAAAAGTCCTCAGGGAATGGTGGAACTTCCTTGGAGATGGAAGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGCTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTGCAGGTCATGCAGTATGGGTCTGAGCAGAATGACCAGACCTTAGATTATTTTACAAACAAAACCAATTTGGAATTGAGTGGACCTTTAATGGCAACAGTTGTTTTATATCTCTCAGACTCTGCTCAAGGGGGTCAAATTCTCTTTCCTGAATCAGTGCCAAGTAGTAGCAGCTGGTCAAGTTGCAGTAACAGTAATAAGACCATCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCTGACAAGAGTAGTTTTCATTCTAGATGCCCTGTGCTTGAAGGGAACATGTGGTCTGCAATGAAATACTTCTATGCAAAACCAATTAGCAGAGACAAGGTCTCAGCAATATCAGACGACGGTGAATGCACTGATCAAGATGACAGTTGTCCTGCTTGGGCAGCCAAGGGAGAATGTCAAAGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACGTGTAGGAAAAGTTGTAATGAATGCTGA 885 0.4192 MASVSLLLALLVFFVMGTSLSNSSRKELRNKEKTALQMLERPVHYSNSINPSRVVQISWQPRVFIYKGFLSDKECDYLISLAYAEKEKSSGNGGTSLEMEDDILARIEERLSAWTFLPKENSKPLQVMQYGSEQNDQTLDYFTNKTNLELSGPLMATVVLYLSDSAQGGQILFPESVPSSSSWSSCSNSNKTIQPVKGNAILFFSLHPSASPDKSSFHSRCPVLEGNMWSAMKYFYAKPISRDKVSAISDDGECTDQDDSCPAWAAKGECQRNPVFMIGSPDYYGTCRKSCNEC* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00604 294 SMART ShkT_1 253 294 IPR003582 -
Lapu4g00604 294 SMART p4hc 61 236 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lapu4g00604 294 ProSiteProfiles ShKT domain profile. 254 294 IPR003582 -
Lapu4g00604 294 FunFam Probable prolyl 4-hydroxylase 12 53 236 - -
Lapu4g00604 294 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 40 234 IPR045054 -
Lapu4g00604 294 Pfam 2OG-Fe(II) oxygenase superfamily 126 236 IPR044862 -
Lapu4g00604 294 Gene3D q2cbj1_9rhob like domain 53 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00604 Lapu-Chr4 6459772 6463489 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00604 K00472 - gmx:100795761 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00604 4 6459772 6463489 Lapu4g00604 4 6459772 6463489 ECH