Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00603 ATGTCATTCCTGTGTGGCTTTCCTCTTGTTGAGTGTGTGTACTGTCTGGCTTGTGCTCGTTGGGCTTGGAAAAGATGTCTTCATACTGCTGGCCATGACAGTGAGAATTGGGGCTTTGCCACAGCGGAAGAATTTGAGCCTATACCACGCCTTTGTCGCTATATTTTAGCTGTGTATGAAGACGATCTTCGCCAACCCCTTTGGGCACCCCCTGGTGGCTATGGAATTAGTCCTGATTGTTTACTTCTCAAAAAGACATATGAAGATACATGTGGAAGGGCACCGCCCTATATACTGTATCTTGATCACGAGCATAATGATATAGTTCTTGCCATCAGGGGTCTAAATTTGGCAAAGGAGAGTGACTATGCTGTTCTTTTGGACAATAGATTGGGGAAGAGAAAGTTTGATGGGGGGTATGTTCACAATGGGTTGTTGAAAGCTGCTGGTTGGGTTTTGGATGCAGAATGTGAAACTTTGAGGGATTTGGTGGAAAAGTATCCAAATTACACTCTGACTTTTGTTGGACATTCCCTTGGATCTGGTGTAGCAGCTATGCTGACAATGGTGGTAGTGCAGAATCGTCATAGACTGGGAGATATTGATCGGAAGAGGGTCAGGTGTTATGGTATTGCACCTGCTAGGTGTATGTCACTGAATTTGGCAGTCAGATATGCAGATGTCATCAACTCTGTTGTGCTGCAGGATGACTTCTTACCAAGGACAGCCACCCCATTGGAAGATATATTCAAGTCTCTTTTCTGTTTGCCATGCCTATTGTGCTTGAGGTGCATGAGGGATACATGCATTCCAGAAGAGAAGATGCTCAAAGATCCAAGGAGACTCTATGCACCCGGTCGCCTTTATCACATTGTTGAGAGGAAGCCTTTTAGAATGGGAAGGTTTCCCCCAGTTGTGAGGACGGCAGTGCCGGTAGATGGAAGGTTTGAGCATATAGTCCTTTCATGTAATGCCACGTCTGATCATGCCATCATTTGGATTGAGAAAGAAGCCCAAAGGGCTCTGGATTTGATGCTGCAGAAAGATGAACCAATGGAAGCCCCTGCCAAGCAAAAAATGGAGCGTCAAGAAACCATGACTAGACACAAGGTTGAATATAAAGCAGCATTACAAAGGGCCAAAACATTAGATGTTCCACATGCTTATACACCACCATCAGAGTATGGCACTTTTGATGAGGAGGGAGATGCCAGCTCAACAAGATCTCAGGGAGAGTCTTCTAATAAAAGTTCAGTGGAGGAAAGCTGGGATGCATTGATTGAACGTCATTTTGACAAGGATGAACATGGCCAAACTGTGCTGAAGAAACAATGA 1335 0.4487 MSFLCGFPLVECVYCLACARWAWKRCLHTAGHDSENWGFATAEEFEPIPRLCRYILAVYEDDLRQPLWAPPGGYGISPDCLLLKKTYEDTCGRAPPYILYLDHEHNDIVLAIRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWVLDAECETLRDLVEKYPNYTLTFVGHSLGSGVAAMLTMVVVQNRHRLGDIDRKRVRCYGIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMRDTCIPEEKMLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMLQKDEPMEAPAKQKMERQETMTRHKVEYKAALQRAKTLDVPHAYTPPSEYGTFDEEGDASSTRSQGESSNKSSVEESWDALIERHFDKDEHGQTVLKKQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00603 444 Gene3D alpha/beta hydrolase 39 252 IPR029058 -
Lapu4g00603 444 MobiDBLite consensus disorder prediction 383 425 - -
Lapu4g00603 444 CDD Lipase_3 44 241 - -
Lapu4g00603 444 SUPERFAMILY alpha/beta-Hydrolases 42 270 IPR029058 -
Lapu4g00603 444 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Lapu4g00603 444 MobiDBLite consensus disorder prediction 400 421 - -
Lapu4g00603 444 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Lapu4g00603 444 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00603 Lapu-Chr4 6449847 6454798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00603 1 444 Miscellaneous Gene Families AT3G49050 70.825 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00603 - - gmx:100796283 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00603 4 6449847 6454798 Lapu4g00603 4 6449847 6454798 ECH