Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00599 ATGCCTTGCTCTTCCTCCACTTCCACCCCCACCGGCGATAACAGCAGCAACAATAATAGAGATGGCTCTTCTTCTCTGCGCGAGTTCAAGCTGAACGAGTCCACTTTCCTAGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCCATCTTCGATTCTGGTGTAGACCCAGCTGCTGATGGATTACAGATTACCTCGGATGGGAAACCAAAAGTTCTCGATATCATTGATTGCACAGGGAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCATATTTGTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCGTGTGGGTTATAAATTGGTTTATGAGCTATTTACGGATACTTTGACTACTAGATTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCCAAGACTGTAAAACAACTTGCTGACTTTGATCAGCAACACATCAAGGTAGAGGATGTACGTCTTAGAAGGGCTCGGGAAGATATCCAGAATAGACTTGATGTTCTGAGAAGGCTATCTGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTAGACACACAGAGTCTGGAGGATGATCCAAATAGTGGAAAGCTTGTTAATTTTCTGCCTTTGACTAATTATAGGATCGAGAGGAAGTATGGTGTCTTCAGCAAATTGGATGCCTGTACATTTGTTGTTAACGTCTTTAATGATGGGAATGTCTTGAGTATTGTAACAGACAGTTCTCCACATGCCACCCATGTTGCCGGTATAGCTACCGCTTTCCACCCAAAGGAGCCTTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTAATTCGGGCACTGATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGAAACATTACTACCAAACTATGGGCGCTTTGTTGACCTTGTTAATGAAGTGGTGAACAAACATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGACCAGCATTGAGCACTGTTGGTGCACCTGGTGGTACTTCATCAAGCATTATAGGCGTTGGTGCATATGTGTCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCTTCTGATGGGCTTGAGTACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTCGGTGTTTGTGTGAGTGCTCCGGGTGGTGCTGTTGCTCCTGTTCCGACGTGGACTCTGCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGAGGAACTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCGTACAGTGTGAGGATAGCACTTGAAAATACTGCTGTCCCCATAGGTGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATGTACAGAAGTGCCAAAATGTTCCATGTGTTTGGTATCAAATAAAAGTCCAGCAATCTGGAAAAACTAATCCTTCATCAAGGGGCATCTACCTTAGGGAGGCTAGTGCTTGCACGCTATCTACTGAGTGGACAGTGCAAGTTAATCCGAATTTTCATGAAGATGCTGACAACTTAGAGGATTTGGTTCCATTTGAGGAGTACATTGAATTACATTCTACAGAAGAGACTGTTGTGAAGGCCCCTGACTATCTATTGCTCACTCATAATGGTCGCACCTTCAATGTAGTGGTTGATCCTTCCAATCTTTGTGATGGTCTTCATTATTTCGAGGTCTATGGTATTGACTACAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCTGAGGCTGTAACTAACCTGCCTCCCCAAATTTCTTTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGGAGATACATCGAAGTGCCACATGGTGCAACTTGGGCTGAAGCAACGATGAAAACTTCAGGCTTTGACACAGCTAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCATTGCAAAGACCTTTGAAATGGGAGACTACTGTAACTTTTCCTTCTCCTGCTGCAAAAAGCTTTGCCTTTAGCGTAGTAAGTGGTCAGACATTGGAACTGGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACCGCAAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATCAAGATGTTATACTTGATGGTAGTGACGCACCAGTTAGGATTGACGCTGAAACTCTACTGGTATCCGAGGAACTTGCACCTGTGGCAATTCTGAACAAGATTAGGGTACCCTATCGACCAGTAGATTCAAAGATTAGTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGAAAGCAGATAATGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCCCACATACCATTGTTAAATGACCGGATATATGATACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCAAACAAGCACGTATATTCAAGTGGAGATGTCTATCCAAGCTCTGCTAATCTTCCCAAAGGAGAATATACTTTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAAGCATTTGGTGTTGTTCATTGAGCAAAATTTGGAAGAGAAGGATGTCATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCATTGATGGGAAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATCAAAGAAGGATTTTATATTGGTCCACCACAAAAAGAAAAGCTTCCCAAGAATTGTCCACAGGGATCAGTATTGCTAGGGGCAATTTCATATGGGAAGCTATCATTTGCTGATCAGGGAAAGAATAAAAATCCTGAAAAGCACCCTGCTTCATATACGATTTCTTATATAGTTCCCCCAAATAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCTAAGAAGAATGTTTCAGAACGCTTAAAGGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGGTGAAGAGCGATTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACCATTTTGCAAGGTTTGGTTTCTAGGAGTAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTGGTGCAGCCGATGAGGTGATTAACAGTATTGATAGAGAAGAGCTAGCAAAGTTTTTTGCGCTAAAAAATGATCCAGAAGAGGAAGAAGCAGAGAATATCAGGAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGTAGATAAGTCCCCAACTTTGGCTGCCACAGAAGGGGCAAAAGGAGGCTTGGACAAAAAACAATCTACAGATGATGGCAGAGATTTGTTTGAAGAGAATTTTAGAGAACTGAAGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATCCTCTTGGTAACACGTGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTATATGACATAATTCAAGATGATGAAGAGCCTGCCAAAAAGAAATTCTACGATCTAAAACTGTCTTTGCTTGATGAGATTGGATGGACACATATAGCTACATATGAGAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTTTTCTAG 3999 0.4299 MPCSSSTSTPTGDNSSNNNRDGSSSLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKVLDIIDCTGSGDIDTSKVVKADADGHICGASGASLVINTSWKNPSGEWRVGYKLVYELFTDTLTTRLKKERKKKWDEKNQEEIAKTVKQLADFDQQHIKVEDVRLRRAREDIQNRLDVLRRLSESYDDKGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLVNFLPLTNYRIERKYGVFSKLDACTFVVNVFNDGNVLSIVTDSSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEETLLPNYGRFVDLVNEVVNKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYVQKCQNVPCVWYQIKVQQSGKTNPSSRGIYLREASACTLSTEWTVQVNPNFHEDADNLEDLVPFEEYIELHSTEETVVKAPDYLLLTHNGRTFNVVVDPSNLCDGLHYFEVYGIDYKAPWRGPLFRIPITITKPEAVTNLPPQISFSKMLFQPGHIERRYIEVPHGATWAEATMKTSGFDTARRFYVDAVQLCPLQRPLKWETTVTFPSPAAKSFAFSVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQDVILDGSDAPVRIDAETLLVSEELAPVAILNKIRVPYRPVDSKISALSTDRDKLPSGKQIMALTLTYKIKLEDGAQIKPHIPLLNDRIYDTKFESQFYMISDSNKHVYSSGDVYPSSANLPKGEYTLQLYLRHDNVQILEKMKHLVLFIEQNLEEKDVIRLSFFSQPDGPLMGNGSFKSSSLVPGIKEGFYIGPPQKEKLPKNCPQGSVLLGAISYGKLSFADQGKNKNPEKHPASYTISYIVPPNKIDEDKGKGSSLSSKKNVSERLKEEVRDTKIKVLASLKQETGEERLEWKELSALLKSEYPKYTPLLATILQGLVSRSNVKDKINHDEEVIGAADEVINSIDREELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKLADLTWCILSKDVDKSPTLAATEGAKGGLDKKQSTDDGRDLFEENFRELKKWVDVKSAKYGILLVTRERRAQRLGTALKVLYDIIQDDEEPAKKKFYDLKLSLLDEIGWTHIATYERQWMHVRFPPSLPLF* 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00599 1332 PRINTS Subtilisin serine protease family (S8) signature 60 79 IPR015500 -
Lapu4g00599 1332 PRINTS Subtilisin serine protease family (S8) signature 479 495 IPR015500 -
Lapu4g00599 1332 PRINTS Subtilisin serine protease family (S8) signature 292 305 IPR015500 -
Lapu4g00599 1332 Gene3D Peptidase S8/S53 domain 43 133 IPR036852 GO:0004252|GO:0006508
Lapu4g00599 1332 Gene3D Peptidase S8/S53 domain 220 554 IPR036852 GO:0004252|GO:0006508
Lapu4g00599 1332 Coils Coil 1166 1186 - -
Lapu4g00599 1332 Gene3D - 556 687 IPR046940 -
Lapu4g00599 1332 Gene3D - 158 216 - -
Lapu4g00599 1332 FunFam Tripeptidyl-peptidase 2 homolog 220 553 - -
Lapu4g00599 1332 ProSitePatterns Serine proteases, subtilase family, serine active site. 480 490 IPR023828 -
Lapu4g00599 1332 Gene3D - 1065 1332 IPR046939 -
Lapu4g00599 1332 FunFam tripeptidyl-peptidase 2 isoform X1 43 128 - -
Lapu4g00599 1332 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 40 522 IPR034051 GO:0006508|GO:0008240
Lapu4g00599 1332 PANTHER PEPTIDASE S8 37 942 - -
Lapu4g00599 1332 Pfam Subtilase family 60 523 IPR000209 GO:0006508|GO:0008236
Lapu4g00599 1332 ProSiteProfiles Serine proteases, subtilase domain profile. 45 543 - -
Lapu4g00599 1332 MobiDBLite consensus disorder prediction 1 25 - -
Lapu4g00599 1332 Coils Coil 197 217 - -
Lapu4g00599 1332 FunFam Tripeptidyl-peptidase 2 556 687 - -
Lapu4g00599 1332 Pfam Tripeptidyl peptidase II 822 1007 IPR022229 -
Lapu4g00599 1332 SUPERFAMILY Subtilisin-like 40 553 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00599 Lapu-Chr4 6367994 6393809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00599 K01280 - gmx:100798235 2386.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00599 4 6367994 6393809 Lapu4g00599 4 6367994 6393809 ECH
Lapu4g00599 4 6367994 6393809 Lapu7g02037 7 36572432 36594806 PCT