Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00586 ATGAGAGAGAACAACGAAATTGTAATCACGCCGATACAAGAGCATAGCGGATCGGGGGTTTTTCGTCATTCCAATAAAGATGGAATCTGGTGGCCGGTCATAAAATCGCTGCCGCGATCCTCGGCGATTCTTCTCTTCCCCGTCGCGCTCGTCATCGGCGCGTTGGCTTACACGCGCGTGATTGACACACAACCTATATTTTCTGGAATTTCATCTGCCAAATCTTCATTAAGCACCACACGTCCTTTCTCAACCCCTTCTAGCATTCAAATAGAGACTCCATTCAACTGCAGTGTATATAATCTCACAAAAACATGCCCCACCAATCAAAACGCAATTCAACAGGATGATCGGAGCCGTTCATCCAGTGCCACGTGTCCAGACTACTTCCGTTGGATCCATGAGGACCTGAGACCATGGGCCCACACTGGCATAACGCAAGAGATGGTGGAGAGGGCAAAAGCAACAGCAAATTTCAAGTTGGTGATTTTGAATGGTAGGGCTTATTTGGAGACCTATGAAAAGTCCTTTCAAACAAGGGATGTTTTTACATTATGGGGCATTTTGCAATTGTTAAGGAGGTACCCTGGACAAGTTCCTGATTTGGAACTCATGTTTGATTGTGTGGATTGGCCTGTGGTTTTGGTTGATCGATATAATGGACCTATTCTTCAACAGCCACCACCATTGTTTCGATATTGTGGGAATGATGCTACCTTGGACATTGTCTTTCCTGATTGGTCCTTCTGGGGATGGGCTGAGGTTAATATAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAAGGGAACAAGAAGATACCATGGCTCAACAGAGAGCCTTATGCATACTGGAAAGGTAATCCATCAGTTGCAGAAACCAGAGAAGACCTCATGAAATGCAATGTTTCTCAAAATCAAGATTGGAATGCTCGTTTATATGCTCAGGATTGGAAACGAGAATCACAACAGGGGTTTAAGAAATCAGACTTGGCAAACCAATGCACTCATAGATATAAGGTGTACATTGAAGGCTCTGCTTGGTCAGTCAGTGAAAAATACATTCTGGCATGTGACTCTACCACTCTACTTGTAAAACCACATTACTATGATTTTTTCACAAGAGGACTGATTCCAGTGCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAATTTGCTGTAGATTGGGGGAATAGTCACAAGCAAAGGGCACATGAAATTGGAAAGGCAGCAAATGAATTCATTCAAGAAGAGTTGAAGATGGATTATGTGTACGACTACATGTTTCATCTGCTAAATGCATATGGTAAGCTATTTACATACAAACCCTCCGTTAGTGTAAATGCTACAGAACTATGTGTGGAGTCAATGGTTTGTGGAGCAGAAGGATTACAAAAAGATTTTATGATGGAATCATTGGTGAAGAGTCCTGCAAAAACCAACCCTTGCACCATGCCTGCCCCTTTTGATCCTCCATCTTTGTACGAACACTTACAGAGAAAGCAAAGTTCAATTCAACAAGTTGAATCATGGGAGAAAACTTACTGGGAGAATCAAACCATGACATCTTAG 1587 0.4279 MRENNEIVITPIQEHSGSGVFRHSNKDGIWWPVIKSLPRSSAILLFPVALVIGALAYTRVIDTQPIFSGISSAKSSLSTTRPFSTPSSIQIETPFNCSVYNLTKTCPTNQNAIQQDDRSRSSSATCPDYFRWIHEDLRPWAHTGITQEMVERAKATANFKLVILNGRAYLETYEKSFQTRDVFTLWGILQLLRRYPGQVPDLELMFDCVDWPVVLVDRYNGPILQQPPPLFRYCGNDATLDIVFPDWSFWGWAEVNIKPWEILLGELKEGNKKIPWLNREPYAYWKGNPSVAETREDLMKCNVSQNQDWNARLYAQDWKRESQQGFKKSDLANQCTHRYKVYIEGSAWSVSEKYILACDSTTLLVKPHYYDFFTRGLIPVHHYWPIKEDDKCRSIKFAVDWGNSHKQRAHEIGKAANEFIQEELKMDYVYDYMFHLLNAYGKLFTYKPSVSVNATELCVESMVCGAEGLQKDFMMESLVKSPAKTNPCTMPAPFDPPSLYEHLQRKQSSIQQVESWEKTYWENQTMTS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00586 528 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 76 522 - -
Lapu4g00586 528 Pfam Glycosyl transferase family 90 122 517 IPR006598 -
Lapu4g00586 528 SMART cap10 198 447 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00586 Lapu-Chr4 6003302 6009211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00586 - - gmx:100800365 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00586 4 6003302 6009211 Lapu4g00586 4 6003302 6009211 ECH