Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00583 ATGGCTCAGAAGGTTGTGTTAAAGGTTTTGACTATGACTGATGACAAAACCAAGCAAAAGGCCATTGAAGCTGCTGCAGATATCTATGGGGTTGATTCAATTGTTGCTGATGTGAAGGAGCAGAAGTTGACAGTGGTTGGTCAAATGGACACAGTGAAAATAGTGAAGAAGCTGAAGAAAGTAGGTAAAGTGGATATAATATCAGTTGGACCTGCAAAAGAAGAGAAGAAAGAAGAAAAGAAAGAGGAGAAAAAGGAAGAAAAGAAGGAAGAGAAAAAGGAAGAGAAGAAAGAGGAGAAGAAGGAAGAGAAGAAAGAAGAGAAGAAGGAGGAGAAAAAATAG 342 0.386 MAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIVADVKEQKLTVVGQMDTVKIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00583 113 ProSiteProfiles Heavy-metal-associated domain profile. 3 66 IPR006121 GO:0046872
Lapu4g00583 113 SUPERFAMILY HMA, heavy metal-associated domain 2 63 IPR036163 GO:0046872
Lapu4g00583 113 Gene3D - 1 75 - -
Lapu4g00583 113 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 99 - -
Lapu4g00583 113 MobiDBLite consensus disorder prediction 72 113 - -
Lapu4g00583 113 Coils Coil 72 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00583 Lapu-Chr4 5977324 5978845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00583 - - vra:106767319 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00583 4 5977324 5978845 Lapu4g00583 4 5977324 5978845 ECH