Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00574 ATGGCTCTGCAATTATGGGAGACACTGAAGGAAGCCATAATTGTCTATACCGGCCTCTCTCCGCCCACCTTCTTTACCCTCCTCGCCCTCATTCTCGCTATCTACTATGTCGTTTCAGGCCTCTTCCCCTCCTCCGACCACCACCGCCACGACGCCCCCCGCGACTTCGAGCCCCAGATGGAGCCTCTGCGACCCCCCGTTCAGATCGGCGAGGTCACCGATGAGGAGCTCAAGGCCTACGATGGTTCTGACCCCGAGAAGCCCCTCCTCATGGCCATCAAGGGTCAGATCTATGATGTTTCGCAGAGCAGAATGTTTTATGGACCCGGTGGACCCTATGCTTTATTTGCTGGCAAGGATGCTAGCAGAGCTTTGGCAAAAATGTCTTTTGACGAGAAAGATCTAACTGGAGATATCTCTGGTCTTGGCCCATTTGAGATTGAGGCCTTGCAGGACTGGGAATACAAGTTTATGGGCAAGTATGTAAAAGTTGGAACTGTTAAAACGAAAGTTCCAGTGACTGAACCATCAGAATCAACACCCCTTGAGGCTGAATCTTCCACGCCTACTGAAGATGGTCCACCAGAATCTGCTGCTGTTAAAAATGACGAAACCCCCTCAAAGGTTGATGCTGATAAAGAATAA 645 0.507 MALQLWETLKEAIIVYTGLSPPTFFTLLALILAIYYVVSGLFPSSDHHRHDAPRDFEPQMEPLRPPVQIGEVTDEELKAYDGSDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFDEKDLTGDISGLGPFEIEALQDWEYKFMGKYVKVGTVKTKVPVTEPSESTPLEAESSTPTEDGPPESAAVKNDETPSKVDADKE* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00574 214 SMART Cyt_b5_2 72 168 IPR001199 -
Lapu4g00574 214 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 65 168 IPR036400 -
Lapu4g00574 214 MobiDBLite consensus disorder prediction 172 193 - -
Lapu4g00574 214 FunFam Membrane steroid-binding protein 1 70 168 - -
Lapu4g00574 214 Gene3D - 70 168 IPR036400 -
Lapu4g00574 214 MobiDBLite consensus disorder prediction 170 214 - -
Lapu4g00574 214 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 23 181 - -
Lapu4g00574 214 Pfam Cytochrome b5-like Heme/Steroid binding domain 73 167 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00574 Lapu-Chr4 5863822 5867380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00574 K17278 - gmx:100780914 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00574 4 5863822 5867380 Lapu4g00574 4 5863822 5867380 ECH
Lapu4g00574 4 5863822 5867380 Lapu7g02058 7 36806641 36810684 PCT