Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00537 ATGATGAAGATGAAGAATAATTATGGTAGTAATAATCATAAGAGAAATGGTCTTTCTTCCATCATGAATGGAGGTTCAGATGGTGGCAGAGTTGAGTCTGGTTCAAAGGAATGGGAGATGAGGCCAGGTGGAATGCTGGTCCAGATGAGAACCTCTGACTCGGATCGGAACTCGGCGCTTGTTCCCACAATTAGAGTTAGGATCAAGTATGGTTCAATTTACCATGAAGTCAACATTAGTTCGCAAGCTACATTTGGGGAGTTGAAGAAAATGCTATCAGGGATAACTGGGTTACACCATCAAGATCAAAAGCTGTTTTACAAAGACAAGGAGAGGGATTCAAAGGCTTTTCTTGACATGACTGGGGTCAAGGATAAATCCAAGATAGTGCTAGTGGAAGACCCTATTAGTCAGGAGAAGAGGTTGTTAGAGATAAGGAAGAATGCCAAGATGGAGAAAGCTGCAAAATCAATCTCAGAAATCAGCTTGGAAGTAGATAGGCTCGCAGGAAGGGTATCAGCCTTTGAGTCAGTTATTAACAAAGGTGGAAGAGTTGCCGAAACAGATGTGCTTAATCTGATTGAGTTATTGATGAATCAATTGCTTAAATTGGATGGTATAATGGCTGAAGGGGAAGTGAAATTACAGAGGAAAATACAGGTAAAAAGAGTTCAAAAGTATGTTGAAACTCTGGATTTGCTGAAGGTTAAGAATTCCATTTCCATGCCTAGTAGCAAAGCAGACCATGCTCCAGTGCAGCCTCAACAGAAGCATTCAAATGGGCAAAGGCTGGGACCAGTTTTACAGCAACAACAAAAGCATTCAAATGGACATAATAGGTTAGCCTTAGCACCAATTCAGGAGCAGCAACAGGAGCAACCAAAGAACTCAAATGAGAATTTTTTAGAACTTTACGATGAACAACAGCATCAACCCTTAAGGAATTCCACTTCAGGAGTTGTAGTTACCACAAATTGGGAATTATTTGAATTTGCCCCACCATTAATCCCTGTTCCATCCACATCCCCTCTCCCACCACCCCCAGTGGCCAATAGTTCAGGTCCTCCAAAGTTCAATTGGGAATTCTTCAACTAA 1095 0.4146 MMKMKNNYGSNNHKRNGLSSIMNGGSDGGRVESGSKEWEMRPGGMLVQMRTSDSDRNSALVPTIRVRIKYGSIYHEVNISSQATFGELKKMLSGITGLHHQDQKLFYKDKERDSKAFLDMTGVKDKSKIVLVEDPISQEKRLLEIRKNAKMEKAAKSISEISLEVDRLAGRVSAFESVINKGGRVAETDVLNLIELLMNQLLKLDGIMAEGEVKLQRKIQVKRVQKYVETLDLLKVKNSISMPSSKADHAPVQPQQKHSNGQRLGPVLQQQQKHSNGHNRLALAPIQEQQQEQPKNSNENFLELYDEQQHQPLRNSTSGVVVTTNWELFEFAPPLIPVPSTSPLPPPPVANSSGPPKFNWEFFN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00537 364 ProSiteProfiles Ubiquitin domain profile. 62 132 IPR000626 GO:0005515
Lapu4g00537 364 Gene3D - 63 133 - -
Lapu4g00537 364 FunFam BAG family molecular chaperone regulator 1 62 133 - -
Lapu4g00537 364 Pfam BAG domain 158 233 IPR003103 GO:0051087
Lapu4g00537 364 PANTHER BCL2-ASSOCIATED ATHANOGENE 19 330 IPR039773 GO:0051087
Lapu4g00537 364 MobiDBLite consensus disorder prediction 1 39 - -
Lapu4g00537 364 FunFam BAG family molecular chaperone regulator 1 132 239 - -
Lapu4g00537 364 Gene3D BAG domain 134 239 IPR036533 GO:0051087
Lapu4g00537 364 CDD Ubl_AtBAG1_like 63 132 - -
Lapu4g00537 364 MobiDBLite consensus disorder prediction 1 23 - -
Lapu4g00537 364 MobiDBLite consensus disorder prediction 243 262 - -
Lapu4g00537 364 SUPERFAMILY BAG domain 117 239 IPR036533 GO:0051087
Lapu4g00537 364 SUPERFAMILY Ubiquitin-like 51 138 IPR029071 -
Lapu4g00537 364 ProSiteProfiles BAG domain profile. 157 235 IPR003103 GO:0051087
Lapu4g00537 364 SMART BAG_1 157 235 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00537 Lapu-Chr4 5402411 5404810 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00537 - - vun:114181975 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00537 4 5402411 5404810 Lapu4g00537 4 5402411 5404810 ECH