Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00474 ATGAGTAACGTGACCGAGAAATTGGGCATTAAGATTGAAAAGAACCCTCCTGAAGACAAGCTCACTCAACTTGGTGTTCACCAATGGCCAAAATGGAGTTGCCCTCCGAGCAAATTTCCATGGACATATGAATCTAAGGAGACTTGCTATCTCTTGGAAGGAAAAGTGAAGGTGACTCCAAGTGGGGAAAATGAGTCGGTGGAAATTGCTGCTGGTGATTTTGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCAGTTGCAGTTGACAAGCACTATAAATTTGAATGA 297 0.431 MSNVTEKLGIKIEKNPPEDKLTQLGVHQWPKWSCPPSKFPWTYESKETCYLLEGKVKVTPSGENESVEIAAGDFVVFPKGMSCTWDVSVAVDKHYKFE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00474 98 SUPERFAMILY RmlC-like cupins 21 95 IPR011051 -
Lapu4g00474 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Lapu4g00474 98 PANTHER OS04G0445200 PROTEIN 2 98 - -
Lapu4g00474 98 CDD cupin_TM1112-like 29 97 - -
Lapu4g00474 98 Gene3D Jelly Rolls 1 97 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00474 Lapu-Chr4 4563906 4565968 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00474 K06995 - gmx:100527331 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00474 4 4563906 4565968 Lapu4g00474 4 4563906 4565968 ECH
Lapu4g00474 4 4563906 4565968 Lapu7g01528 7 30712925 30714843 PCT