Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00367 ATGGCCAGGAAGATGCATTGCGCCCCTCAAGAGATAGGTAATGATAATCCAAAAGTTTCGGAAACAAGAAAGGATTCCATATCAACAATATATCAACAACAAAATAAATTCACATCTTTAGAGGGTTGTCAAGAATCTTCTCTTTCAAGGATTAACTCTGATAGTAGGTGTGCCATCATTTCATTCAATTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCCTACCAGGGCAGTGTCTCAATTACATTAACTTAGCTTCTGGTGTAAATATGGATGGTGTGCAACTGCTTGTCTCTCCGCCGCTTAATAGGTTGAAGACTGATAAATGTAAGGGCTCTAGAGTGCCACTTCCTTCCTATGCTTATTCAGCTAAATCATGTACAAAAAAAGGCTTTACTAGTTCAAATGTGCATCGTCGATGCCAAAACAAGATTGCTAACAGAGCTTCTAAACTGAATGAACTCCCTGTCAATTCAAGTTCTCAAAGCTCATTAATCTGCAGCCCTGGTTTGTTCCTTGATAGTTCTGTAGAAGTTAATTCATCTGATAAGCACGCAAGTAATTCCAAGGAAGACGACAAATCTTTGAAGAAAAACACAAAAAAACGTGCGAAAAAGAAAGTTAAACGGAGTAAGAAGAAGTCAATTGACAGTGGCTCTACTGAACGTGAAGTTCGTGCTGAGGAATATGTCTGTGTAAGTTTGGCTTCTGAAACCTGCAGCAGCAATGTTGGGGAAAAGGAGGGTGTGGCAGAATTTTCAACATCTGATGATAGATTAATAAAATCTGATTGTGGCAGAAATGAGATGAATGAAAACATCGAAGTTACGGAAGCACTTAACTATAGTAACTCTTATCTTGATCAGGCAGTGGTGTCAAAAGATTCTGCACTCACTATTCCAAGTTCTACTGGAGAATGTGCCAAATTTGAATCCAAGAATCGGCTCAAAGATAGGGACCCTGATTTGGCAGTCATTGATAGGGAAATAAAGAACATCCAACATGCTCAGCCATGCAGTTTTAATGATATACAAGACTCTTTTGTGCTGGATTCAGTTTCAGTTGGTTCCAGAAGTGATGAAAGTATAAATGCAGATGATATAGGAAAACAGTCCAACAAGGCAAATTGCACAACCACTTCAGGTTCAGGAGATGGATATTTTCTTTGTCAAAATTTGACGAATGGTATTCACAATAACTGTGAGCATATTGAGGGGATTAGGCACGGTGGTCAAAATTGCATCAGTAACGATAAAAGAGTTAAGCAGAAGAGAACAATGTCTAACAGTTCAGGTTTAAACAAATTTGGGGGTGTTGGAATTTTGCATGGTAGAAAAGGAAAAGAAAACAGTCATTCTGTTTGGCAAAAGGTTCAGAAGAATAGTTCTGGTGAATGTAGCAGCGATTTGAAGAAAGTAAACACTACTTTGTCACAACTTGCTTCCACTGTGGAAAAGGATCCCTCGGTTATTAAAGAATGTAATTCTGTTGGTGTAAATGGTGTATCAAAACCTGAGGATAAGAAACACATGAAAAATAAAATTGGTAAAAAATCAAAAGGTAAAATGGACTCGGTGTCAAAAAAGGGACCCAGCAATTATTCTAGGAAGAGTTTGCATTTTAACAGGTCTTTGTCAAATGATCATGGGAAGGTTGGTGTTCAAGAGAATGATATGTTGCATATCTCATCTAAGGAAATTGATCAGCATGGATTGAACAATGACTCTGGATTTAATGCTGATGTACATTGCTTGATGGACAGGATCCAGACCAATGGAGTTGAACAGGTAACATTTGAAAAAAATCACAGTGCAGAATTTCATCTGGAGGAGTCAGATCCACAAAATAGTGCCTGCCATACTGCTGCAAACACAAACAAGGAAAATATAGATAGTCAGGATAGCTCATTAGCAATGCCAAATGAGAATGTTAATCAATCAAATATATCTGAGGAGCTGTCTCCAGCGTCCTGCAATCTTGAAGGTGATGATGAGGTTGGTCAAACAGAGAAAGAAGTTTCTTCTGCAGACTACAGTGCACAAAACCAGTGGTCTGGAACTACCCTATGGAAATGGATACCAGTTGCGAAAAAAGATACAGGGTTGGAAAAATCTGAATCTAATATTTCACCACCAGATTATTCTGATGCATCCTCTAGTAACAATTTTAACTGCGAAAGCAGTGTTGAACCAGAAGTGGCCTCTTCTGAAAATAAGGATTCTTCACAAAATGCAAGAAGATTATCAAACGGCCAGATTTACAACAATGTGTCCTGTCTAGGTCAGGGTGAGAGCGAGAACCATAAATTGGGTGGTAAGGTTGCATTTACATTGACACAGCATAGGGACAATCAAGAAGTTTCTAATCATGTGTTTTATGAAAGCAAAAATCAAGAAATGTTAGAAAAGGATTCTTACAGAATATCTCAAGCTGTGAATGATGCATGTAGGGCACAACTAGCTTGTGAAGCGGTGCACATGGCTACAGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTACATTTTGGTAGTCCTGTGATTTGTAAATCACTCAATTCAATCAGTTGTTCGACCTGCTCACACAACCATGCTGGTGGTGTCTCACTGTGCAGACATGAGATCCCTAACCTATCTTTAGGATGCCTGTGGCAGTGGTACGAGAAACATGGGAGCTATGGATTAGAGATAAGTGCACAGGATCATGAAAATCCAAAGAGGCCAGGAGGTGTTGGTGATTTTCCATTCCGTGCCTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCATGAATATCAATGTGTAAATAGCGGTGACAAGCTTTCAAATTGTGAGGTTTCAGAGGCCTGCAAAATGATGGATATTTCAGAAAACTCATCTAGTGCCAGTCAACATTCAATATTTTCTGTTCTCTTTCCACAGCCTCGCAATCAGGATGCAAGCATTGAAATGCCAAAGAAGACGGCTTCTATCACTAATAGATCTATTCCGTCTATCAACTCAATGTGCTCTGGTGATTTAGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGACAGCCTCTGTATGAGAAGATACAAGAACTGGTTAGAGGAAATATACCAATCCAATCTTCAACGTATGGGGACCCAACAAAACTTGATTCAATAAACCTGCGAGATCTTCACCCTAGATCTTGGTTTTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGTGCATCTTTTTTGACTTACCATTCACTTGGACATTTGGTTCGTAGAACAACAGATTCAGATTTGTCAACCTCAGGTTCTTGCATAGTATCCCCAGCTGTGGGTCTTCAAAGCTACAATGCCCAGGGTGAATGCTGGTTCAAGCTGAAGCATTCCGCACTGGTAGCACAAATGGTGGGCTTAGACCCTTCTTTAGTTCTGAGAGAACGTTTGAAGACACTTGAGGAAACAGCATCTCTGATGGCAAGAGCTGTGGTCAACAAGGGGAACCTAACATGTAGAAACAGACACCCTGATCATGAGTTTTTCTTGTCTAGGCGACGGTATTGA 3573 0.3974 MARKMHCAPQEIGNDNPKVSETRKDSISTIYQQQNKFTSLEGCQESSLSRINSDSRCAIISFNFEPDGTWRIVALPGQCLNYINLASGVNMDGVQLLVSPPLNRLKTDKCKGSRVPLPSYAYSAKSCTKKGFTSSNVHRRCQNKIANRASKLNELPVNSSSQSSLICSPGLFLDSSVEVNSSDKHASNSKEDDKSLKKNTKKRAKKKVKRSKKKSIDSGSTEREVRAEEYVCVSLASETCSSNVGEKEGVAEFSTSDDRLIKSDCGRNEMNENIEVTEALNYSNSYLDQAVVSKDSALTIPSSTGECAKFESKNRLKDRDPDLAVIDREIKNIQHAQPCSFNDIQDSFVLDSVSVGSRSDESINADDIGKQSNKANCTTTSGSGDGYFLCQNLTNGIHNNCEHIEGIRHGGQNCISNDKRVKQKRTMSNSSGLNKFGGVGILHGRKGKENSHSVWQKVQKNSSGECSSDLKKVNTTLSQLASTVEKDPSVIKECNSVGVNGVSKPEDKKHMKNKIGKKSKGKMDSVSKKGPSNYSRKSLHFNRSLSNDHGKVGVQENDMLHISSKEIDQHGLNNDSGFNADVHCLMDRIQTNGVEQVTFEKNHSAEFHLEESDPQNSACHTAANTNKENIDSQDSSLAMPNENVNQSNISEELSPASCNLEGDDEVGQTEKEVSSADYSAQNQWSGTTLWKWIPVAKKDTGLEKSESNISPPDYSDASSSNNFNCESSVEPEVASSENKDSSQNARRLSNGQIYNNVSCLGQGESENHKLGGKVAFTLTQHRDNQEVSNHVFYESKNQEMLEKDSYRISQAVNDACRAQLACEAVHMATGGPVAEFERLLHFGSPVICKSLNSISCSTCSHNHAGGVSLCRHEIPNLSLGCLWQWYEKHGSYGLEISAQDHENPKRPGGVGDFPFRAYFVPSLSAVQLFKNHEYQCVNSGDKLSNCEVSEACKMMDISENSSSASQHSIFSVLFPQPRNQDASIEMPKKTASITNRSIPSINSMCSGDLELLFEYFEFEQPQQRQPLYEKIQELVRGNIPIQSSTYGDPTKLDSINLRDLHPRSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRTTDSDLSTSGSCIVSPAVGLQSYNAQGECWFKLKHSALVAQMVGLDPSLVLRERLKTLEETASLMARAVVNKGNLTCRNRHPDHEFFLSRRRY* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 1 21 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 503 525 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 701 747 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 184 198 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 705 747 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 654 679 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 181 220 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 199 213 - -
Lapu4g00367 1190 Pfam Protein of unknown function (DUF789) 834 1184 IPR008507 -
Lapu4g00367 1190 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 12 1189 - -
Lapu4g00367 1190 MobiDBLite consensus disorder prediction 501 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00367 Lapu-Chr4 3741810 3750520 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00367 - - gmx:100798960 1699.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00367 4 3741810 3750520 Lapu4g00367 4 3741810 3750520 ECH