Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00362 ATGCTCGTAACCTCCAAACCCTCTCCAATGGCGCAAGATCTCAAACCCTCCATCAACTCCTTCTCGCTCCCCAAAACCCTAAAGCTCAAGACCAAGCAGCAGGAGCTCCTCATTCGCGTTGCCACACTCGCTCTCATCTACGTACTCGCCTTCATCACTCGCCTCTTCAGCGTCCTTCGCTATGAGTCCATGATCCACGAGTTCGATCCTTACTTCAACTACCGCACCACTCTCTTCCTCACGCGCAATGGCTTCGCCGAGTTCTGGAACTGGTTCGACTCCGAGTCCTGGTACCCGCTCGGTCGCATCATCGGCGGCACGCTTTACCCTGGCCTCATGCTCACTGCCGCCGCCATCCACTCCCTCCTTCGCTTCCTCCGCCTCTTCGTTCACATCCGCGAGGTCTGCGTTCTCACTGCACCTTTCTTCGCCTCCAACACCACCCTTGTCGCGTATTTCTTCGCTAAGGAGGTCTGGGATTCCGGCGCCGGCATTGTTGCCGCTGCACTCATCGCGATCTGCCCGGGGTACATCTCGCGCTCCGTCGCTGGATCTTACGACAACGAGGGCGTGGCGATCTTCGCGCTGTTGCTGACTTTTTACCTCTTTGTGAAGGCCGTGAACACTGGGTCGCTGGCGTGGGCTTTGGGTTCGGCGTTTGGGTACTTCTACATGGTGTCGGCGTGGGGAGGTTACGTTTTTATAATCAATTTGGTGCCGCTTTATGTGCTGGTGCTGCTTGTGACGGGGAGGTACTCTTTGAGGTTGTATGTGGCGTACAACTGCATGTATGTGTTGGGGATGCTGCTGGCAATGCAGATTAGGTTTGTGGGGTTCCAGCATGTGCAGTCCGGGGAGCACATGGCGGCAATGGGCGTGTTTTTCTTGCTGCAGGTGTTTTTCTTCCTGGATTGGGTGAGGCATTTGCTTAGTGACACCAAGCTGTTTCAGGCCTTTTTGAAGATCACTGTGACCAGTGCGGTTGCTGTTGGTGGTGTTGCTTTGGGAGTAGGCATGGCGTCTGGTTATATTTCTCCATGGACTGGGAGGTTTTACTCCTTGCTTGATCCAACTTATGCTAAGGATCACATTCCAATTATAGCATCTGTCTCTGAGCATCAACCAACTGCTTGGTCGTCCTTCATGTTTGATTTCCATATCTTGCTGTTCCTTTTCCCTGCTGGTCTCTATTTTTGCTTCAAGCGCTTGTCTGATGCCACAATCTTTTTAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGGGTTATGGTCCGATTAATTCTTGTTGCTACTCCTGCTGTGTGCCTCATTAGTGCTATTGCGGTTTCTGCCACAGTCAAGAATTTGACACGGGTAGTGAGAGCCAAGAGCCCAGCTGTTCAAAGTGGATCTTCTAAAGGAACTAGCACTGCAAAAGGTTCTTCTAAGGGTGTAGTTGACCACTCCCAGCCTTTCCAAAGGAATGGTGCAATTGTGTTACTCCTTGGCGCTTTCTATTTGCTCAGTAGATATGCTATTCACTGCACTTGGGTCACATCAGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCTCATGGCCAAAGGGTCATCTTTGATGATTATCGTGAAGCATACTTTTGGCTTCGCCAGAACACCCCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACTGTAATTGTTGACAATAATACCTGGAATAACACTCACATAGCTACCGTTGGGCGAGCAATGTCATCCTATGAGGATGAGGCTTATGAGATAATGAGATCGCTTGATGTGGACTATGTATTGGTCGTGTTTGGTGGTGTTACTGGTTATTCTTCTGATGATATTAATAAATTTCTTTGGATGGTGAGAATTGGTGGCGGAGTTTTTCCTGTGATAAAGGAACCTGATTACCTTGTCAATGGAGAATATCGTGTAGATAAAGGAGCTGCTCCAAAGATGTTGAACTGTCTTATGTACAAGCTATCTTATTATCGGTTTGGGGAGCTGACAACAGAATATGGCAAGCCACCTGGATATGATCGCGCTAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTTGAGTACTTGGAAGAGGCACTCACTACACAAAATTGGATAGTTCGTATTTATAAAGTGAAACCTCCTAAAAACAGGTGGTAG 2199 0.4866 MLVTSKPSPMAQDLKPSINSFSLPKTLKLKTKQQELLIRVATLALIYVLAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTRNGFAEFWNWFDSESWYPLGRIIGGTLYPGLMLTAAAIHSLLRFLRLFVHIREVCVLTAPFFASNTTLVAYFFAKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALGSAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVRHLLSDTKLFQAFLKITVTSAVAVGGVALGVGMASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFLVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKSPAVQSGSSKGTSTAKGSSKGVVDHSQPFQRNGAIVLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEALTTQNWIVRIYKVKPPKNRW* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00362 732 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 25 731 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lapu4g00362 732 Pfam Oligosaccharyl transferase STT3 subunit 39 518 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lapu4g00362 732 Gene3D - 535 685 - -
Lapu4g00362 732 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 534 686 - -
Lapu4g00362 732 MobiDBLite consensus disorder prediction 461 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00362 Lapu-Chr4 3686432 3692468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00362 5 731 Miscellaneous Gene Families AT1G34130 85.734 0.0 1271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00362 K07151 - gmx:100816018 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00362 4 3686432 3692468 Lapu4g00362 4 3686432 3692468 ECH