Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00343 ATGGAGAAACTCAGGCCAGCGTGGGCTGTCAAAGCGATCATCGTGATCGTTTTCACTTCGATTCTTTTTCGATGCGTCTGCGGCGAGAATCGTACCGTCGGTGGACCTTCCGGCTGGGATCTCCGTTCCAATATCCAGGCCTGGTCTTCTACGACAACGTTTAATATCGGAGACGATCTCGTGTTCTCATACACGCCAGTTCACGACGTGGTGGAGGTAAACCAACTAGGTTACGACACGTGCACAATAGCCAATGCGCTTGCCACGTACGACAACGGGGACACCGTGATTCACTTAGGCGGCGCGGGAACACGATACTTTGTGTGTGGCCGAATGGGCCACTGTCAACAGGGCCTTAAACTCCAGGTCCAAGTCCTAGCCCAGTCCAACAACGGAACCAACGATGATGATCAAAACCAAGACCCCGGCACCACTGCTTCTCCGCCTCCTCCTCCTCCTCCTCCTCCGCCAGCTTCTCAGCCCCCTCACGATGACGAACACCCACCCGCTGATGAGCCCTCACCCTGCGACTGTTCTCATGCGGATGAGCGTTTTGGGGCGGGGCCGTTAATTACGCTCGTAATCGTGCTCGCTTTCGCCCGAGCTCCTTTCTTCTTCGCTCTTCCGCGACTCCGTTTTCATCTCATGCGTTAA 654 0.555 MEKLRPAWAVKAIIVIVFTSILFRCVCGENRTVGGPSGWDLRSNIQAWSSTTTFNIGDDLVFSYTPVHDVVEVNQLGYDTCTIANALATYDNGDTVIHLGGAGTRYFVCGRMGHCQQGLKLQVQVLAQSNNGTNDDDQNQDPGTTASPPPPPPPPPPASQPPHDDEHPPADEPSPCDCSHADERFGAGPLITLVIVLAFARAPFFFALPRLRFHLMR* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00343 217 PANTHER BLUE COPPER PROTEIN 30 140 IPR039391 GO:0009055
Lapu4g00343 217 FunFam Blue copper 27 131 - -
Lapu4g00343 217 MobiDBLite consensus disorder prediction 144 163 - -
Lapu4g00343 217 SUPERFAMILY Cupredoxins 30 126 IPR008972 -
Lapu4g00343 217 Gene3D - 28 131 IPR008972 -
Lapu4g00343 217 MobiDBLite consensus disorder prediction 164 179 - -
Lapu4g00343 217 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Lapu4g00343 217 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Lapu4g00343 217 MobiDBLite consensus disorder prediction 130 180 - -
Lapu4g00343 217 CDD Phytocyanin 32 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00343 Lapu-Chr4 3570726 3572211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00343 13 149 Miscellaneous Gene Families AT2G32300 38.406 7.38e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00343 - - gmx:102664120 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00343 4 3570726 3572211 Lapu4g00343 4 3570726 3572211 ECH