Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00338 ATGCTTTTGACTATTTGTTGTTGCTATCGGACTGTGACACTCAGGATTCTCACTCCTATTCCTTTGGTCCACTCTTTCTATCAAACCTTTTTCTTTTTTTATCATCACTCACAAAAACATTCGTCACTGTTTTTTAAATCAACTTCTTCCTGCATATCAAGCCCTCTTCCTGCACTTCTCATAGGGGGGCTTGAAGCAAGGATATTGATGGTGAGGGACCCCAACATGAGCAAGGAAAAGGTGATTTCAAATTTCACATTGCTTCACTCATCCACAAAAGGGTCCAAGGACAAGAGCACCCCCAACAACAATAACATGCCCTCCTGGCTACTCACCAACATTTCTGAATTGGAGGAGAGGATGAAAGTGTTGACAATGAGTACAACCGATGAAGAAGAAATTGGCGATACCTTTGCTGAAAGAGCAGAGTCCTACTACCAAAAGAGACCTCAGCTACTGTCCCTTCTGCAGGACTTATACAATGGCTACATAACCTTATCTGACCGTTACATACAAACACTGGCCAAACACAAACATCATAGTAGACACTCTTCCCAAGTCTCAACTGTTGATGAAGGCTTCTCTGACCAGGAAGAAGCAAGTGGTGTGAGCCACGTTGATTCAGATATGGAGAGCTCAATCTCCTACCAACATCCTCCCCACATGATGATGTCTAATGTTCTATCCAAGAGCTCCATGCTTGATGTTGATGCCGTTGTTGCCGAACTTGTAATTAGGAATGTTGAGTATGACTTGTTGATGCACGAGGTTGGTGTCATGGAGAGGAGGTACTGTGAGTCCTCAAGGAAAAGTGAGCTACAAAAGAGCCTTCTTGAGGTGTTGGAGTCTGAGAGGATTGTTCTGTTGAATGAGAATGCTAGCTTGAGTTATAGAATCAACACTTTGGTGGAAGAGAACAAAGAGCTGGCATCCGAGTCAGTTTTCATCAAGAGAAAGGCTGGTGAGCTGGCAAAGTGTGTGCTGAAGATGAGGGAGGATCATAGAGTGTACATGCTACACAGGAAAATTGAAGATCTTCAAGCACAGATACATGGCTTGGAGAAGAGGAACAAGGAGTACTATGAGAAACTTCTGAGAAGAGATGGTCTAGATGGTAACAAAGGGAAGAGTGGTGAGGGGATAGCTTTGGAGGTTTGTGTTCAGATGGATAAGCTTAGGAGGTTCAAGTGGAAAGACGGTAATTCGTCTGGGAAGAGATTTGATGGGAAGAAATCCCCTAGTTTGTGGAAAAAGCTGAAGAACATGGATTTGTTGTTGTGTGGCACTAATCCAACCTGTGCTTGA 1305 0.4352 MLLTICCCYRTVTLRILTPIPLVHSFYQTFFFFYHHSQKHSSLFFKSTSSCISSPLPALLIGGLEARILMVRDPNMSKEKVISNFTLLHSSTKGSKDKSTPNNNNMPSWLLTNISELEERMKVLTMSTTDEEEIGDTFAERAESYYQKRPQLLSLLQDLYNGYITLSDRYIQTLAKHKHHSRHSSQVSTVDEGFSDQEEASGVSHVDSDMESSISYQHPPHMMMSNVLSKSSMLDVDAVVAELVIRNVEYDLLMHEVGVMERRYCESSRKSELQKSLLEVLESERIVLLNENASLSYRINTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYMLHRKIEDLQAQIHGLEKRNKEYYEKLLRRDGLDGNKGKSGEGIALEVCVQMDKLRRFKWKDGNSSGKRFDGKKSPSLWKKLKNMDLLLCGTNPTCA* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00338 434 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 91 177 IPR011684 GO:0003779
Lapu4g00338 434 PANTHER PROTEIN NETWORKED 4A 98 223 - -
Lapu4g00338 434 Pfam KIP1-like protein 104 170 IPR011684 GO:0003779
Lapu4g00338 434 Coils Coil 336 363 - -
Lapu4g00338 434 MobiDBLite consensus disorder prediction 181 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00338 Lapu-Chr4 3518879 3523544 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00338 - - gsj:114389453 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00338 4 3518879 3523544 Lapu4g00338 4 3518879 3523544 ECH