Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00252 ATGAGACGGGTACCCTCCATTCTGTTCAGAACGCTCGCCGCCCAACGCGCCACCTCCTACGTCGTCCACAACCGCCTTCTCCACGGCAGCGCCGCCGCCGCAGCCGCCTCCCACTCCCACCGTCGCCGCTTCTCCTACCTCCTTGCTCCCTTCGCCGCCGCGTCTCTCGGAGTCGCCGGCGCCCTCGTCTCTCAGGAAGTCCTCGCCAAGGAGCCTCCGCCGCCCGAGGCTCTTCCACGCGACGTCGTTCTTTACCAGTTCGAGGCTTGCCCTTTCTGCAACAAAGTCAAAGCATTTCTTGACTACTATGATATACCTTACAAAGTTGTGGAAGTCAACCCTCTCAGCAAGAAAGAAATCAAATGGTCTGAGTATCAGAAAGTCCCAATATTGGTGGTAGATGGCGAGCAGCTAAATGATTCATCAGTTATAATTGATAAGCTGGGACTTAAGATTCTGTCGAAGAAAATTGTAGATTCAACTTCTGAGGATGAAGAGACAAAATGGCGACGGTGGGTTGATAACCATTTGGTGCATGTTCTGTCACCAAACATTTATCGCAATACATCTGAAGCACTTGAATCCTTTGAGTATATTACTAGCAATGGCAATTTCAGCTATATAGAAAAAATTTCGGTGAAGTTTGCTGGAGCTGCAGCTATGTACTTTGTGTCCAAGAATCTGAAGAAGAAATACAACATAACTGATGAACGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGAAGCTCTGAATGGGCGGGAATTCCTTGGAGGGTCTAAACCTAACTTAGCCGACCTGGCGGTCTTTGGGGTTTTAAAACCCATACGCTATTTGAGGTCTGGCAAGGATATGGTGGAGCACACTCGTATTGGTGAGTGGTTTTCAAGAATGGAGAGTGCTGTTGGAGAACCTTCTAAAATTAAAGCCTAA 936 0.4861 MRRVPSILFRTLAAQRATSYVVHNRLLHGSAAAAAASHSHRRRFSYLLAPFAAASLGVAGALVSQEVLAKEPPPPEALPRDVVLYQFEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPILVVDGEQLNDSSVIIDKLGLKILSKKIVDSTSEDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFEYITSNGNFSYIEKISVKFAGAAAMYFVSKNLKKKYNITDERAALYEAAETWVEALNGREFLGGSKPNLADLAVFGVLKPIRYLRSGKDMVEHTRIGEWFSRMESAVGEPSKIKA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00252 311 Gene3D - 159 309 - -
Lapu4g00252 311 ProSiteProfiles Glutaredoxin domain profile. 70 168 - -
Lapu4g00252 311 Pfam Glutathione S-transferase, C-terminal domain 236 301 IPR004046 -
Lapu4g00252 311 ProSitePatterns Glutaredoxin active site. 84 100 IPR011767 -
Lapu4g00252 311 SFLD Prostaglandin E synthase like.1 59 310 IPR034334 GO:0050220
Lapu4g00252 311 SUPERFAMILY Thioredoxin-like 81 151 IPR036249 -
Lapu4g00252 311 Pfam Glutathione S-transferase, N-terminal domain 84 148 IPR004045 -
Lapu4g00252 311 CDD GST_C_mPGES2 162 305 IPR034335 -
Lapu4g00252 311 SUPERFAMILY GST C-terminal domain-like 158 303 IPR036282 -
Lapu4g00252 311 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 7 310 - -
Lapu4g00252 311 Gene3D Glutaredoxin 76 155 - -
Lapu4g00252 311 SFLD Glutathione Transferase (cytosolic) 59 310 IPR040079 -
Lapu4g00252 311 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 80 156 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00252 Lapu-Chr4 2526329 2531697 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00252 K05309 - gmx:100775694 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00252 4 2526329 2531697 Lapu4g00252 4 2526329 2531697 ECH