Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00229 ATGTCGCTCCACGGCAGCGACCGCCGTGATACGTCCAGCGCCGGCGGAAACGGCACCGTGGCGGCGGCGAGCCTGAGGCTTCGGCTGAACCCTAACAAGGAGCACAAGCCTGACGGCTACGAGGACCTGCAGTTGGATTTCAGCCCTAACATCTTCAGCTCCTTGGAGAGGTACCTCCCTCCGAGCATGCTCAACGTGCCTCGAGACGATAAGGCCAAGTTCATGCGCGAGATTCTGCTCAAGTATCTACCCCTTGGGGAACGCAGCAGATCTCAAAAGCATAGAGAATACAGACAGAAGATAATAGAAAATTATCAGCCTCTACATCGGGAGTTGTACTCTGTGAATCCTGCTACATTCTTTGTCCCCTCATTTCTGAGAGCAATTAATGATAATTCTGAGCAAAGCTTTAGAAGTATAATGTCTGAGCCCTCTCCAGGCATTTTTATATTTGACATATTTCAGACCGACTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAGTTTCGGATCATGCGTCCCAATACAATGAATAAATATGGTGCTGTACTTGATGATTTTGGACTTGAAACAATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTTTATCCAGAGTCTTATTTGCGGAAGTTGGTGGGGCTACCCTGGATTCTCATCATGGTTTTGTTGTAGAATATGGTAAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGACTCAGAAGTAACCTTAAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATACGATGTGAGAAGCATGTAAATACTGGAACTCATTCAGAGGAAATCTTTGATTATTCTCATGTTCCTGGACGAGCTGTACTTCATCGTGGTCGTCATCGCCATGGTGCAAGAGCTACAACGTCCGGTAATCGGGTCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTTTAGGGAGATGAAACGGTATCAAAAGGATTTCTCTAGCTGGTGTGGCGAGTGCAGTCGTGAGAAAAAGGAAAGGCAACGCTCAACAATTGCTGCTACCAAATTGGAGTTGTTCAGGAGGGAAGGTGAATCCACTGCATAA 1125 0.456 MSLHGSDRRDTSSAGGNGTVAAASLRLRLNPNKEHKPDGYEDLQLDFSPNIFSSLERYLPPSMLNVPRDDKAKFMREILLKYLPLGERSRSQKHREYRQKIIENYQPLHRELYSVNPATFFVPSFLRAINDNSEQSFRSIMSEPSPGIFIFDIFQTDFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGTHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRREGESTA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00229 374 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 18 363 - -
Lapu4g00229 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 326 IPR005123 -
Lapu4g00229 374 Gene3D q2cbj1_9rhob like domain 145 326 - -
Lapu4g00229 374 MobiDBLite consensus disorder prediction 1 19 - -
Lapu4g00229 374 SMART p4hc 146 325 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lapu4g00229 374 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00229 Lapu-Chr4 2300878 2309631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00229 - - gmx:100816390 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00229 4 2300878 2309631 Lapu4g00229 4 2300878 2309631 ECH