Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00223 ATGATTCTTAACCACGCTGGCGCCGGATTCTGTTGGGTCGACCCGCCACAACTCGACCGGAACAATAAAACCCGACTCGCTTTCTTGCGTTTTCATCGCCGGCGGGTGACGCCGCAGAGTGTGGCGTTCCACGGCGTGCGAATGGAGAAGAAAGACCACAAACGGCGATCAATATGCACCGCCGACGAGCTTCACCGCGTCGAGGTTTCGAACTCCGATTGGAAGCTCGCTCTATGGCGCTACCTTCCTTCTCCCGAGGCACCGTTGAGGAATCACCCGCTTTTGTTGTTGTCAGGGGTTGCTACCAATGCAATTGGCTATGATCTCTCTCCTGAGTCTTCATTTGCTCGGTACATGTCGGCACAAGGTTTTGATACGTGGATTCTTGAGGTTCGTGGTGTTGGGTTGAGCACCATTGTAGACAGCTTGGAGGAAGACGGGGAATGTCTAAAGAATTTATCAGAGATTGATTCTGCTATTAGTGATGGAATTGGTAAAAGCAGTGCTTCTCCAGCAAGAGTAATGGGATCCAAGAACCTTGGCTCTCCAGAGGTTATAACTAAATTTGAGGAAATGAGGCTAACAAGGAGGTTCATGGACATTTTTACTAGGATATCTGAAAAGCTTGCAGGCTTTCTCAATCCGGATTTGTTGGAGGGAGGAAAGAACTCTGGAATTGTTAGTCAAATTAAGGATTTCAATAGAAGAGTTCGAGCTATTATTGAAGGTCAACAGTTGTTCCCAGAACAGATTTTAGAATTGCAAGACCGTTTTTCTGCCACTCTAGAAGACTTTCAAAAACAGCTTCAGTTGATTGTTAAGTATGATTGGGACTTTGACCATTATCTGGAAGAGGATGTACCTGCTGCGATGGAGTACATAAGAGCTCAATGCCAGCCAAGGGATGGAAAATTGCTGGCAATTGGTCACTCAATGGGGGGTATCTTGTTGTATGCAAATCTTTCACGTTGTTGTTTTGATGGAAAGGATTCTGGATTGGCATCTGTTGTTACTTTAGCATCATCACTTGACTATTCCTCTTCAAGATCATCTCTCAAGTTGCTTTTACCCCTGGCAAAACCTGCTCAGGCTTTGAACATTCCAGCTATTCCAGTTGGGCCATTGATGGCCACTGTTTATCCCCTTGCAAGCTACCCTCCATATGTTTTATCTGGGTTGAATTCTCAGATTTCAGCTCAAGATATGATGGATCAAAAGCTATTTGAGAAGCTTGTTTTGAACAACTTCTGTACCATACCTGCCAAGATTCTCTTGCAGTTATCATCAGTTTTCCAAGAAGGTGGTTTACGTGACAGGAGTGGAACATTCTTCTATAAGGACCATCTCTGCAAAATTAATGTTCCTGTCTTAGCAATAGCTGGTGACCAAGACTTGATCTGCCCTCCTGAAGCTGTATATGAAACGGTGAAACTTATTCCTGAAGAATTGGTTACATACAAAGTGTTTGGGGAGCTTGGTGGTCCACACTATGCCCACTATGACTTAGTGGGTGGTCGTCTGGCTGCAGATGAACTGTATCCGTGTATAACTGAATTTCTCACTCACCATGACATGGTCTAG 1581 0.4491 MILNHAGAGFCWVDPPQLDRNNKTRLAFLRFHRRRVTPQSVAFHGVRMEKKDHKRRSICTADELHRVEVSNSDWKLALWRYLPSPEAPLRNHPLLLLSGVATNAIGYDLSPESSFARYMSAQGFDTWILEVRGVGLSTIVDSLEEDGECLKNLSEIDSAISDGIGKSSASPARVMGSKNLGSPEVITKFEEMRLTRRFMDIFTRISEKLAGFLNPDLLEGGKNSGIVSQIKDFNRRVRAIIEGQQLFPEQILELQDRFSATLEDFQKQLQLIVKYDWDFDHYLEEDVPAAMEYIRAQCQPRDGKLLAIGHSMGGILLYANLSRCCFDGKDSGLASVVTLASSLDYSSSRSSLKLLLPLAKPAQALNIPAIPVGPLMATVYPLASYPPYVLSGLNSQISAQDMMDQKLFEKLVLNNFCTIPAKILLQLSSVFQEGGLRDRSGTFFYKDHLCKINVPVLAIAGDQDLICPPEAVYETVKLIPEELVTYKVFGELGGPHYAHYDLVGGRLAADELYPCITEFLTHHDMV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00223 526 PANTHER LYSOSOMAL ACID LIPASE-RELATED 49 522 - -
Lapu4g00223 526 Gene3D alpha/beta hydrolase 267 522 IPR029058 -
Lapu4g00223 526 Gene3D alpha/beta hydrolase 60 161 IPR029058 -
Lapu4g00223 526 PIRSF UCP031088_abhydr 185 526 IPR016969 -
Lapu4g00223 526 PIRSF UCP031088_abhydr 17 216 IPR016969 -
Lapu4g00223 526 SUPERFAMILY alpha/beta-Hydrolases 66 523 IPR029058 -
Lapu4g00223 526 FunFam Alpha/beta hydrolase family protein 270 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00223 Lapu-Chr4 2210614 2215476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00223 - - gmx:100808317 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00223 4 2210614 2215476 Lapu4g00223 4 2210614 2215476 ECH