Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00214 ATGAAGGCAGCACATATTGCTTTGTGCACTTTGGTGGTGCTGCTTGTGGCTGAAGTTCAAGTGTCAATGGCAGTAACATGCAGCCCAGTACAGCTGAGTTCATGTGTGAGCGCAATAACCTCTTCAACTCCTCCATCAAACCTATGCTGCTCCAAGATCAAGGAACAGAAACCATGTCTTTGCCAATACCTCAAGAACCCCAATCTGAAGAAGTTTGTGGACTCTCCTAATGCAAGGAGAGTTGCTAGCACTTGTGGAACTCCCTTCCCAAGATGCTAA 279 0.4659 MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCLCQYLKNPNLKKFVDSPNARRVASTCGTPFPRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00214 92 Gene3D - 25 92 IPR036312 -
Lapu4g00214 92 CDD nsLTP2 27 92 IPR033872 GO:0006869
Lapu4g00214 92 Pfam Probable lipid transfer 21 87 IPR016140 -
Lapu4g00214 92 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 92 IPR033872 GO:0006869
Lapu4g00214 92 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 92 IPR036312 -
Lapu4g00214 92 SMART aai_6 27 92 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00214 Lapu-Chr4 2139039 2139317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00214 1 92 Acyl Lipid Metabolism Gene Families AT3G18280 54.839 3.10e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00214 - - gmx:113002176 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00214 4 2139039 2139317 Lapu4g00214 4 2139039 2139317 ECH